| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rxyl_1627 |
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| Symbol | |
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| ID | 4116334 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rubrobacter xylanophilus DSM 9941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008148 |
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| Strand | - |
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| Start bp | 1653876 |
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| End bp | 1655846 |
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| Gene Length | 1971 bp |
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| Protein Length | 656 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 638036426 |
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| Product | proton-translocating NADH-quinone oxidoreductase, chain L |
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| Protein accession | YP_644400 |
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| Protein GI | 108804463 |
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| COG category | [C] Energy production and conversion
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG1009] NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit |
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| TIGRFAM ID | [TIGR01974] proton-translocating NADH-quinone oxidoreductase, chain L |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAGAGCC TGGGCCAACA GCTGGTTATC GCGGCCATAC CGGTGATACC GCTCGTGGTG
TTCTTCGTGC TGGCGCTCTT CGGGCGCCTG CTGCGGGAGA ACGCCCAGTA CGTGGCCATC
TTCGGGATGG TCTTCTCGGT GGTCTTCTCG TTCTTCGCGC TCTACCTGGT CATCCGGGAC
GGCCGGCCGC TGGAGTTCTC CGTGTACTGG ATAAACCTGG GGGAGGGCGG CGGCTTCCCC
ATCGGGGTGT ACATAGACGA GCTCGCGGCG GTGATGCTGG TCGTGGTGAG CTTCGTGAGC
CTCATGATCC AGCTCTACTC CGGCGGGTTC ATGGCGGGCG ACCGGCGCTT CGCCTGGTAC
TACGCGGTGC TCAACCTGTT CACCGCCTCG ATGCTCGGGC TGGTGGTGGC GCCCAACTTC
ATCGAGCTGT ACATCTGCTG GGAGCTGGTG GGCCTGTGCT CGTACCTGCT CATCGGGCAC
TGGTTCGAGA AGCCCGCCGC CCGCGACGCG GCGCTCAAGG CGTTCATCGT CACCCGCATC
GGGGACGCGG CGCTCTTCGT GGGGATCATC ATGTTCTGGC GCGCCACCGG GACCACGGCC
TTCGAGGGCA TCGCCGAGGC CGCGCAGGCC GGGTTTATCG GGGGGTCGCT GCTGACCGCC
GCGGTGGTGC TGGTGTTCGT CGGGGCGATA GGCAAGAGCG CCCAGTTCCC GCTGCACGTG
TGGTTGCCGG ACGCGATGGA GGGTCCGACC CCGGTGTCGG CCCTGATCCA CGCGGCCACC
ATGGTCGCCG CCGGCGTCTA CCTGGTGGCC CGCACCTACG ACATCTTCGT GCAGAGCCCC
ACGGCGATGC TCATCGTCGC CTACATCGGG GCCTTCACCG CGTTCATGGC CGCGACGATG
GCGCTGGTCA AGAAGGACAT AAAGCGGGTG ATCGCCTACT CCACCGTCTC CCAGCTGGGG
TACATGATGC TGGGGCTCGG GGTGGGGGCC TTCTCGGCCG GGATGTTCCA CCTCTACAAC
CACGCCTTCT TCAAGGCGCT GCTCTTCCTG TGCGCGGGCA GCATCATCCA CGCCATGGAC
TCCTACAACC TCTTCGAGAT GGGGGGGCTG AGGCGGAGGA TGCCGCTGAC CTTCTGGACC
ATGGTGATAG CCGGCCTCTC GCTCGCGGGG ATCTTCCCGC TGGCGGGGTT CTGGTCGAAG
GACGCGATCA TCGCCTCGGC CTTCGAGGAG CACTACTACG TTCTGTACGC GCTGGCCATC
GGGACGGTGT TCCTGACGGC CTTCTACATC TTCCGGGCCA TCTTTCTGGC CTTCACCGGC
GAGCCCCGGA CGGAGGGCGC GGCCCGGGCC GTCGAGTCCC CGGGCGTGAT GACGGTCCCG
ATGGTGATCC TGGCCGTCCT CTCGGTGGCG AGCGGCTGGG TGGGCATCCC GGAGGGCTTC
GGGCTGCCGG TGCGCGACTA CTTCGGGGGC TTCGTCGCCC CGAGCGGGTT CGCCCGGGAG
ACGCTGGAGG TCGAGCCCCA CGGCTTCAGC TTCCTGCTCG CCGCGATCTC GGTGCTCGTG
GGGCTCGCCG GCATCGGGCT GGCCTACGCG ATGTACGTGG CGCGGCCGGC TCTGGCGCCC
GCCATGGCCC GCCGCCTCTT TGGGCTCCAC ACCTTCCTGG ACAAGGGCTG GTACTTCGAT
GCCCTCTACG GGGCCACCTT CGTGCGGGCC GCTTTTGCGG TGGGGCGGGC GGTGCAGGGC
TTCGACCGCG AGGTGCTCGG GGGGCTCGTG GGCGGCATCG CCCGCGGGAC CGGGCGGCTC
GGCGAGGCGC TCCGGCGGGT GCAGACCGGG CGGGTCCAGA ACTACGCGCT GTTCATCGTC
GTCAGCGTGC TGGTGCTGGC CATAGTGGCG GGCGCCCAGT ACGCGGTCAT CGTGGCGGCG
CTGATAGCGC TGGTGACGCT GGCGACTCTG GCGGTGGGGG CTAGACTGTG A
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| Protein sequence | MQSLGQQLVI AAIPVIPLVV FFVLALFGRL LRENAQYVAI FGMVFSVVFS FFALYLVIRD
GRPLEFSVYW INLGEGGGFP IGVYIDELAA VMLVVVSFVS LMIQLYSGGF MAGDRRFAWY
YAVLNLFTAS MLGLVVAPNF IELYICWELV GLCSYLLIGH WFEKPAARDA ALKAFIVTRI
GDAALFVGII MFWRATGTTA FEGIAEAAQA GFIGGSLLTA AVVLVFVGAI GKSAQFPLHV
WLPDAMEGPT PVSALIHAAT MVAAGVYLVA RTYDIFVQSP TAMLIVAYIG AFTAFMAATM
ALVKKDIKRV IAYSTVSQLG YMMLGLGVGA FSAGMFHLYN HAFFKALLFL CAGSIIHAMD
SYNLFEMGGL RRRMPLTFWT MVIAGLSLAG IFPLAGFWSK DAIIASAFEE HYYVLYALAI
GTVFLTAFYI FRAIFLAFTG EPRTEGAARA VESPGVMTVP MVILAVLSVA SGWVGIPEGF
GLPVRDYFGG FVAPSGFARE TLEVEPHGFS FLLAAISVLV GLAGIGLAYA MYVARPALAP
AMARRLFGLH TFLDKGWYFD ALYGATFVRA AFAVGRAVQG FDREVLGGLV GGIARGTGRL
GEALRRVQTG RVQNYALFIV VSVLVLAIVA GAQYAVIVAA LIALVTLATL AVGARL
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