| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rxyl_1626 |
|---|
| Symbol | |
|---|
| ID | 4116333 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rubrobacter xylanophilus DSM 9941 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008148 |
|---|
| Strand | - |
|---|
| Start bp | 1652425 |
|---|
| End bp | 1653879 |
|---|
| Gene Length | 1455 bp |
|---|
| Protein Length | 484 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 638036425 |
|---|
| Product | proton-translocating NADH-quinone oxidoreductase, chain M |
|---|
| Protein accession | YP_644399 |
|---|
| Protein GI | 108804462 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1008] NADH:ubiquinone oxidoreductase subunit 4 (chain M) |
|---|
| TIGRFAM ID | [TIGR01972] proton-translocating NADH-quinone oxidoreductase, chain M |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.87188 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGATAACGA CGGCTACGAT CTTTATACCG CTGCTGGGGG CGATCCTCGT GCTGCTGCTG
CGCGGGGACG AGCGGCTCGT GCGCTACGCG GCCATCGGGG TCGCCGCGGT GCCGGTGCTG
CTCGCGCTCT ACATCTACTT CGCCTTCGGG GACGACCTGG ACGCCCCGGC GCTCAGCCAG
GAGCTGACCT GGATAGAGTC GCTCGACATC GGCTACCGGG TGGGGCTCGA CGGCATCGGG
TTCGGGATGT TCTTCCTCTC GGCGCTGCTC ACCCTCATCG CGGTGGTCGC CTCGTGGGAC
ATCCGGGAGA ACCTGGGCTT CTACTTTGCG CTCCTGTTCC TGGCCGAGGT CGGGATGCTC
GGGGTCTTCG CCTCCCGCGA CCTCGTGCTC TTCTACGTCT TCTTCGAGAT CACGCTCATC
CCCATGTACC TGATGGTGGG GATCTGGGGG GACGAGAACC GCCGGGCGGC GGCGATAAAG
TTCTTTATCT ACACCTTCCT GGGCTCGACG GCGATGCTGG CGGGCTTTCT GGCGCTCGGG
GTGCTCTCCG GGACGTTCTC CATCCCCGAG CTGGGCGAGG CCGGCGGGCT CTCGCGCGCG
GCCCAGATAG CCATCGCCGT GCCGGTGCTC TTCGGGCTCC TGATCAAGGT GCCGGCCGTG
CCGCTGCACG GCTGGCTGCT CGACGTCTAC GTCTCCAGCC CCGTCTCGAC GAACGTGGTG
CTCTCGGGGG TGCTGCCGAA GCTGGGGACC TTCGGCATCC TGAAGATCGC CATCCCGCTG
CTGCCGGATG GGGTGGAGCC CTTCCTGCCC TACCTGGCGG TGCTCGGGGT GATAAACATA
ATCTACGGGG CCTTCGTGGC GTTCCTGCAG CCGGACCTGA AGGCGCTCGT GGCCTACTCC
TCCATCGGGA CCCTGGGCTT TATCCTGCTC GGGGCGGCCT CGGCGAACGC GGTGGGCTAC
AACGGGGCGG TCTTCCAGCA GGTCGCCCAC GGGCTCTACT CGGCGCTTCT GTTCCTGCTG
GTCGGGATCA TCGCGGCGCG GACGGGGACC CGCCGGATCT CGGAGCTCGG CGGGCTCGCC
GCCCGGATGC CCTGGGCGGG GGGGCTTCTC GCGCTCGGGG CCCTGGCGGC GATGGGGCTT
CCGGGGCTCG CGGTGTTCGT CTCCGAGTTC ATGAGCATCA TGGGCGGGTA CACCACCTAC
CCGGTGCAGG GGGTTCTGGC CGCACTCGGG ATCATCCTCT CGGCGATGTA CCTGCTGTAC
ATGCTGGCGC GGGTCATCTT CGGGCCCATC CGTGAGCCGG CGTACGAGCA GATCGGGGAC
GCCGGGCCGG TGGAGATGGC CGCCGTGGTC CCGCTGGCGG CGCTGTTGCT GGTGCTCGGC
TTCTTCCCGG CGCTGCTGAT CAGCGTCCAG CGCCCGGCGG TGGAGGCCGT GTTGGCCGCG
ATAGGAGGTG GCTAG
|
|---|
| Protein sequence | MITTATIFIP LLGAILVLLL RGDERLVRYA AIGVAAVPVL LALYIYFAFG DDLDAPALSQ
ELTWIESLDI GYRVGLDGIG FGMFFLSALL TLIAVVASWD IRENLGFYFA LLFLAEVGML
GVFASRDLVL FYVFFEITLI PMYLMVGIWG DENRRAAAIK FFIYTFLGST AMLAGFLALG
VLSGTFSIPE LGEAGGLSRA AQIAIAVPVL FGLLIKVPAV PLHGWLLDVY VSSPVSTNVV
LSGVLPKLGT FGILKIAIPL LPDGVEPFLP YLAVLGVINI IYGAFVAFLQ PDLKALVAYS
SIGTLGFILL GAASANAVGY NGAVFQQVAH GLYSALLFLL VGIIAARTGT RRISELGGLA
ARMPWAGGLL ALGALAAMGL PGLAVFVSEF MSIMGGYTTY PVQGVLAALG IILSAMYLLY
MLARVIFGPI REPAYEQIGD AGPVEMAAVV PLAALLLVLG FFPALLISVQ RPAVEAVLAA
IGGG
|
|---|
| |