| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rxyl_1622 |
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| Symbol | |
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| ID | 4116329 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rubrobacter xylanophilus DSM 9941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008148 |
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| Strand | - |
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| Start bp | 1648573 |
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| End bp | 1649142 |
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| Gene Length | 570 bp |
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| Protein Length | 189 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 638036421 |
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| Product | sigma 54 modulation protein / SSU ribosomal protein S30P |
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| Protein accession | YP_644395 |
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| Protein GI | 108804458 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1544] Ribosome-associated protein Y (PSrp-1) |
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| TIGRFAM ID | [TIGR00741] ribosomal subunit interface protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.543969 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGAGATCG TGGTCAAGGG GCGCAACATC CCGGTCACCG ATTCCCTGGA GCGCTACGCC
GTAGAGAAGG TCGAGCGGGT CCGCAAGTTC TTCGACGACG ACCGGAGCGT GGCGCGCGCC
GAGGTCGAGC TCATCCACGA GCGGAACCCC TCCATCGCCG CCTCGGAGGT CGCCGAGACC
ACCCTGTTCA TCAACGGGGC GGTCCTCAAG GCGCGCGAGG CCTCCGAGGA CATGTACGCC
TCCATAGACC GGATGAGCGA CAAGCTCGAG CGGCAGGTGA AGCGCTACCG GGGACGGCAG
GTGGACCGCT GGCACGGGCG GCTCAAGAAC CACGAGGGCG CGAGGGCCGA GCCGCAGCCC
TTCGTGGCCG AAGAGGAGGA GGACATCGAG CCCCGGATAG TGCGCACCAA GCAGTTCCAG
ATGAAGCCCA TGAGCGCCGA GGAGGCGGTG CTCCAGATGG AGCTGCTCGA CCACGACTTC
TTCGTGTTCA CCAACGCCGA TACGGGCGAC ATAAATGTGG TATACCGTCG TCGCGACGGC
AACTACGGGC TCATAGAGCC GGCAAGGTAG
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| Protein sequence | MEIVVKGRNI PVTDSLERYA VEKVERVRKF FDDDRSVARA EVELIHERNP SIAASEVAET
TLFINGAVLK AREASEDMYA SIDRMSDKLE RQVKRYRGRQ VDRWHGRLKN HEGARAEPQP
FVAEEEEDIE PRIVRTKQFQ MKPMSAEEAV LQMELLDHDF FVFTNADTGD INVVYRRRDG
NYGLIEPAR
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