Gene Rxyl_1617 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRxyl_1617 
Symbol 
ID4116363 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRubrobacter xylanophilus DSM 9941 
KingdomBacteria 
Replicon accessionNC_008148 
Strand- 
Start bp1642247 
End bp1642714 
Gene Length468 bp 
Protein Length155 aa 
Translation table11 
GC content74% 
IMG OID638036416 
Productprotein of unknown function DUF395, YeeE/YedE 
Protein accessionYP_644390 
Protein GI108804453 
COG category[R] General function prediction only 
COG ID[COG2391] Predicted transporter component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones3 
Plasmid unclonability p-value0.0000235117 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGTTGAGGA TGCTCGCCGC TCTCGTCTCC GGCTCTCTCT TCGGCGCGGG GCTTGCCGTC 
TCGGGCATGA TCAACCCGGA GAAGGTGCTC GGGTTCCTGG ACCTCGCCGG GCGCTGGGAC 
CCCACCCTGG CCTTCGTCAT GGGCGGGGCG CTGCTCGTCG CCCTCCCCGC CTTCCGCCTC 
GTGCTGCGCC GGGAGAGCCC CCTGCTCGCT CCGCGCTTCG ACCTGCCGGC GAAGAGGGAG 
GTGGACGCGC GGTTGATCCT GGGCTCCGCC GTCTTCGGCG TCGGGTGGGG GCTCGGGGGT 
TTCTGCCCCG GGCCGGCCGT GGCCGCCCTG GTGACCGGCC GGGGGGCCGT GATCGCCTTT 
GTTCTCGCCA TGCTCGCCGG GATGGCGCTC CACTCGCTCC TCTTCGAGCG GGAGGGGCTC 
GCCGGGCGCG CGGCCGCTAT GCGCGGGCGG AGACATGCCG ACGGCTAG
 
Protein sequence
MLRMLAALVS GSLFGAGLAV SGMINPEKVL GFLDLAGRWD PTLAFVMGGA LLVALPAFRL 
VLRRESPLLA PRFDLPAKRE VDARLILGSA VFGVGWGLGG FCPGPAVAAL VTGRGAVIAF 
VLAMLAGMAL HSLLFEREGL AGRAAAMRGR RHADG