Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rxyl_1592 |
Symbol | |
ID | 4117038 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rubrobacter xylanophilus DSM 9941 |
Kingdom | Bacteria |
Replicon accession | NC_008148 |
Strand | - |
Start bp | 1616506 |
End bp | 1617639 |
Gene Length | 1134 bp |
Protein Length | 377 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 638036390 |
Product | phage integrase |
Protein accession | YP_644366 |
Protein GI | 108804429 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG4974] Site-specific recombinase XerD |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCGAAGA AGAAGCGTGG CAACGGTCAG GGCACCGTCT ATAAGCGCAG GAACAAGGAC GGGAAGGTCA TTGGCTACCG CGGCAGCTAC TTCGCGCCGG ACGGCAAGCG CCGGTACGTG TCGGGCAAGA CCAAGACGGA GGCGCAGCGG CTGCTGAGAC AGGCGATGGC GGACGCGGAC CGCGGGCTCG TCTTCGACGC CGGTAAGCTG ACCGTAGGGG AGTACCTGGA CCGTTGGCTT GAGGACTCTG TGAGGGACAC GGTGCGCCAG CGCACATACG AGCGGTACGA GCAGATCTCG CGGGTGCACA TCAAGCCTGC ACTGGGGCGC ATCAAGTTGG CTGCCCTGAC CCCTGTCCAC GTGCGCGGGC TCTACCGCGA GAGGTTGGAC GCAGGGCTCA GCTCCCGAAC CGTCCGCTAC ATCCACACCA CACTGCACAA GGCGCTGGAG GCGGCCGTTG TGGACGGCCT GATCCCACGC AACGTGGCGT CTACCGTCAA AGCGCCTTGT CCTCGAGGGC CGGATATCAG ACCGCTCTCT CAGGAGCAGT CGCGCAAGTT TCTGGAGGTG GCGCGAGAAG ACAGGTTTTA TGCCCTCTAC GTGCTCGCGC TGCACTGCGG GCTCCGGGAG GGCGAACTGC TGGGCCTGAA ATGGGAGGAC GTTGACCTGG AGGGTGGCAC ACTCCAGGTG CGCAGGACGC TTTCGGAGAC TCGCACGGGG CACAAATTCG AGCTGCCCAA GAACGGCAAG GGCCGCTCTA TAAAACTCTC CCGGAGGGCC GTGGAAGCCC TCAGAAGCCA CCGCAGGCGC CAGAACGAGG AGAGGCTGAG GGTGGGCTCC CTGTGGCAGG ACAACGACCT CGTGTTCCCT ACCACGACCG GAACGACCAT GAGGGCTACG AATCTCTTGG GTCGGCACTT CAAGCCGCTC CTTGAGAAGG CCGGGCTACC CGCCATCCGG CTCCATGACT TGAGGCACAC TTGCGCTACA ATACTCCTCG TGGCAGGCAA GCACCCCAAA TACGTCCAGG AGCTCCTGGG GCACGCCAGC ATCTCTATCA CGCTGGACAT CTACAGCCAC GTGATAGAGA GGATGGATGG CGGCCTCGCT GAGGCTATGG ACGAGGCCCT TTGA
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Protein sequence | MAKKKRGNGQ GTVYKRRNKD GKVIGYRGSY FAPDGKRRYV SGKTKTEAQR LLRQAMADAD RGLVFDAGKL TVGEYLDRWL EDSVRDTVRQ RTYERYEQIS RVHIKPALGR IKLAALTPVH VRGLYRERLD AGLSSRTVRY IHTTLHKALE AAVVDGLIPR NVASTVKAPC PRGPDIRPLS QEQSRKFLEV AREDRFYALY VLALHCGLRE GELLGLKWED VDLEGGTLQV RRTLSETRTG HKFELPKNGK GRSIKLSRRA VEALRSHRRR QNEERLRVGS LWQDNDLVFP TTTGTTMRAT NLLGRHFKPL LEKAGLPAIR LHDLRHTCAT ILLVAGKHPK YVQELLGHAS ISITLDIYSH VIERMDGGLA EAMDEAL
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