| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rxyl_1580 |
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| Symbol | |
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| ID | 4116462 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rubrobacter xylanophilus DSM 9941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008148 |
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| Strand | - |
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| Start bp | 1605090 |
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| End bp | 1605680 |
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| Gene Length | 591 bp |
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| Protein Length | 196 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 638036377 |
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| Product | protocatechuate 3,4-dioxygenase, alpha subunit |
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| Protein accession | YP_644354 |
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| Protein GI | 108804417 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3485] Protocatechuate 3,4-dioxygenase beta subunit |
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| TIGRFAM ID | [TIGR02423] protocatechuate 3,4-dioxygenase, alpha subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0572513 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGGCGCC AGAGAGAGGA GCTCCGGCTC ACCCCCTCGC AGACCGTCGG CCCCTACCTG
AGCCTGGGGC TTCTGCGCGA GGACTGGACG CACCTCGTCC CCCCGGATCA CCCGCGGGCC
ATAAGGATAG AGGGCACCCT CTACGACGGC GCGGGGGAGC CGGTTACCGA CGGGCTGGTG
GAGATCTGGC AGGCAGCCCC CTCCGGGCGC TACGACCACC CGGCCGACGA CCGGGAGGAG
CTGCCCCTGG AGGAGGGCTT CCACGGCTTC GGGAGGAGCG GCACCGAGGA CGGGGGGCGC
TTCTCGTTCG TCACGCTCAA GCCCGGCCCC GTCCCCGGGC CGGACGGGGC CACCCAGGCG
CCGCACATCA TGGTCGCGGT CTTCGCCCGG GGGCTCCTGA AGCAGCTCAT AACCCGCATC
TACTTCGAGG ACGAGCCCGA GGCCAACGCC GAAGACCCGG TGCTCCGCTC CATCGGGGAC
GAGCGCCTCA GGAAGACCCT CATCGCCGGC AGGGAGGGCG AGAGCCGCTA CCGCTTCGAC
ATCCGCCTGC AGGGCGAGGG GCAGACGGCC TTCTTCAAGC TCTCCCCATG A
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| Protein sequence | MGRQREELRL TPSQTVGPYL SLGLLREDWT HLVPPDHPRA IRIEGTLYDG AGEPVTDGLV
EIWQAAPSGR YDHPADDREE LPLEEGFHGF GRSGTEDGGR FSFVTLKPGP VPGPDGATQA
PHIMVAVFAR GLLKQLITRI YFEDEPEANA EDPVLRSIGD ERLRKTLIAG REGESRYRFD
IRLQGEGQTA FFKLSP
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