| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rxyl_1579 |
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| Symbol | |
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| ID | 4116461 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rubrobacter xylanophilus DSM 9941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008148 |
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| Strand | - |
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| Start bp | 1603747 |
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| End bp | 1605093 |
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| Gene Length | 1347 bp |
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| Protein Length | 448 aa |
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| Translation table | 11 |
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| GC content | 77% |
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| IMG OID | 638036376 |
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| Product | 3-carboxy-cis,cis-muconate cycloisomerase |
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| Protein accession | YP_644353 |
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| Protein GI | 108804416 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0015] Adenylosuccinate lyase |
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| TIGRFAM ID | [TIGR02426] 3-carboxy-cis,cis-muconate cycloisomerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.13236 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCGGGG AGCTCTTCGG GCCCATCTTC GTCCCGGAGC GCTTCCGCGA GGCGGTCTCG
GGAGGGGCGT GGCTGCGGGC GATGCTGGAG GCGGAGGGGG CGCTAGCCCG GGCCGGGGCG
CGGGCCGGGG TGGTCCCGCC GGAGGCCGCG GAGGAGATCT CCCGCCGCTG CAGGGAACTG
GAGCTCGACC CGGAGGAGCT CGGGGAGCGG GGCCGGGCAG CGGGGAACCC CGTCCCGGCG
CTGGTGAAGG AGCTCACCGC CGCGGTCCCC GGCGAGGCCG CCCGCCACGT CCACAGGGGC
GCGACGAGCC AGGACATCAC CGACACCGCC GCCATGCTGA TCTCGCGGGA GGCGCTGGGC
CTGATCCTGC GGGAGCTCGA CGGGGTCTGC GCCGCGTGCG CCCGCCTCGC GGAGGAGCAC
CGCGAGACCC TCGTGGCGGG GCGCACGCTG CTGCAGCAGG CGCTCCCCAC GACCTTCGGC
CTGAAGGCCG CCGGGTGGCT CGTCGCCGCC CTCGAGGCCC GCAGGGTTCT CCGGGAGGCG
AGGGAGAGGG GGCTCGCGGC CCAGCTCGGC GGGGCGGCCG GGACGCTCGC CTCTCTGGGG
GAGAGGGGGA CGCGGGTGCT GCGGGAGTAC GCCCGGCTGC TCGCGCTGCC CGAGCCCGCC
CTGCCGTGGC ACGCGGCAAG GTTCAGGGTG GCGGAGCTCG GCGGGGCGCT CGCCCTCGCC
GCCGGGACCC TGCACAAGGT GGCGCTCGAC GTCATCCTCA TGGCCCAGAC CGAGGTGGGG
GAGGCGGCGG AGCCCTCGGG AGGCGGGCGT GGCGGCTCCT CCACCCTGCC GCACAAGCGG
AACCCGATCC TCTCGGTGGT CGCCTCGGCG AACGCCCGGC GGGTACAGGA TCTGGCCCGC
ACCCTCTACG GCTCGCTGGC CCAGGAGCAC GAGCGGGCCG CCGGGGCCTG GCACGCCGAG
TGGGAGGCCC TCTCGGGCGC CCTGGCCCTC ACGGGCGGGG CCGCCGCCGC GGTGCGCGAG
GCCCTGGAGG GGCTGGAGGT CCGTCCCGGG AGGATGGCCG AGAACCTGGC GGTCACGGAG
GGTTTGATCC TGGCGGAGAA CGTGACCACG CTGGCCGCGG AGCGGCTGGG GAGGCTGGAG
GCCCACGAGC TGGTCGAGGC CGCCTGCCGG CGGGTCGCGG AGGGCGGGGG GACGCTGCGC
GAGGAGATCC TGGCGGAGCC CCGGCTGCGG GAGGCGCTCT CGGAGGAGGA GATCGAAGGG
GCCCTCGACC CGGCGCGCTA CCTGGGGGCG GCGGACGAGT TCGTGGACCG GGCGCTAGAG
ATGTACCGGA GGGAGGGACA GCGATGA
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| Protein sequence | MSGELFGPIF VPERFREAVS GGAWLRAMLE AEGALARAGA RAGVVPPEAA EEISRRCREL
ELDPEELGER GRAAGNPVPA LVKELTAAVP GEAARHVHRG ATSQDITDTA AMLISREALG
LILRELDGVC AACARLAEEH RETLVAGRTL LQQALPTTFG LKAAGWLVAA LEARRVLREA
RERGLAAQLG GAAGTLASLG ERGTRVLREY ARLLALPEPA LPWHAARFRV AELGGALALA
AGTLHKVALD VILMAQTEVG EAAEPSGGGR GGSSTLPHKR NPILSVVASA NARRVQDLAR
TLYGSLAQEH ERAAGAWHAE WEALSGALAL TGGAAAAVRE ALEGLEVRPG RMAENLAVTE
GLILAENVTT LAAERLGRLE AHELVEAACR RVAEGGGTLR EEILAEPRLR EALSEEEIEG
ALDPARYLGA ADEFVDRALE MYRREGQR
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