Gene Rxyl_1577 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRxyl_1577 
Symbol 
ID4116459 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRubrobacter xylanophilus DSM 9941 
KingdomBacteria 
Replicon accessionNC_008148 
Strand- 
Start bp1602582 
End bp1602968 
Gene Length387 bp 
Protein Length128 aa 
Translation table11 
GC content72% 
IMG OID638036374 
Product4-carboxymuconolactone decarboxylase 
Protein accessionYP_644351 
Protein GI108804414 
COG category[S] Function unknown 
COG ID[COG0599] Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit 
TIGRFAM ID[TIGR00778] alkylhydroperoxidase AhpD family core domain
[TIGR02425] 4-carboxymuconolactone decarboxylase 


Plasmid Coverage information

Num covering plasmid clones6 
Plasmid unclonability p-value0.00107459 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAGCGACC CCGCCTACGA GAGGGGCCTC CGCGTCCGGA GGGAGGTGCT CGGCGACGCG 
CACGTGGACC GGGCGCTCGC CTCGGCGACG GACTTCACCG CCGACTTCCA GGACTTCATC 
ACCCGCTACG CCTGGGGGGA GGTCTGGACC CGCCCCGGCC TGGACCGCAA GACCCGCAGC 
TGCATGACCA TGACCGCGCT CATCGCCGCG GGCCGTCTGG ACGAGCTGGA GATGCACGTC 
CGGGCCGCCC TCAGGATCGG GCTGACCCCC GACGAGATAA AGGAGGTCAT CCTCCACAGC 
GCCATCTACT GCGGCGTCCC GGCCGCCAAC TCCGCCTTCG CCGTCGCCCA GCGCGCCATC 
TCCGGCCAGG AAGACCCCGG CGGCTGA
 
Protein sequence
MSDPAYERGL RVRREVLGDA HVDRALASAT DFTADFQDFI TRYAWGEVWT RPGLDRKTRS 
CMTMTALIAA GRLDELEMHV RAALRIGLTP DEIKEVILHS AIYCGVPAAN SAFAVAQRAI 
SGQEDPGG