Gene Rxyl_1569 details

Gene Information

• Locus tag: Rxyl_1569
• ID: 4116451
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Rubrobacter xylanophilus DSM 9941
• Kingdom: Bacteria
• Replicon accession: NC_008148
• Strand: -
• Start bp: 1592303
• End bp: 1594297
• Gene Length: 1995 bp
• Protein Length: 664 aa
• Translation table: 11
• GC content: 71%
• IMG OID: 638036366
• Product: acetoacetyl-CoA synthetase
• Protein accession: YP_644343
• Protein GI: 108804406
• COG category: [I] Lipid transport and metabolism
• COG ID: [COG0365] Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases
• TIGRFAM ID: [TIGR01217] acetoacetyl-CoA synthase

Plasmid Coverage information

• Num covering plasmid clones: 9
• Plasmid unclonability p-value: 0.504924
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGGCGAGG TGCTCTGGGC TCCGCCGCCG GACGTCCTGG AGAAGACCGA GATCGGACGC 
TACGTGCGCT GGTTGCGCGC GGAGCGCGGG CTCGGGTTCG GCGGCTACGA GGATCTCTGG 
CGCTGGTCGG TCGAGGACCT GGAGGGGTTC TGGAGCTCGA TCTGGGACTT CTTCGGCGTG 
CGGTCGTACA CCCCGCCGCA GCGCGCGCTG GCTTCCCGCG AGATGCCCGG CGCGCGCTGG 
TTTCCGGGGG CGCGCCTGAA CTACGCGGAG AGGATCCTCG CGCCCGCGGG TGACGACGCG 
CGGACGGCCA TCATCGCCCA CTCCCAGAGC AGGGGCCCCC TCGAGCTGAC CTTCGGCGAG 
CTGCGGGAGC AGGTGGCGAG GGCCCGCGCC GGGCTGCTCC GCCTCGGCGT CGGGCCCGGC 
GATCGCGTCG TCGCCTACCT GCCGAACGTT CCGGAGACCG TCGTCGCCTT CCTGGCGACC 
GCCAGCCTGG GCGCGGTGTG GGCGACGTGC GCTCCGGAAT TCGGGCCGCG GAGCGTCGTC 
GACCGCTTCG GCCAGCTCGA CCCGAAGGTG CTGCTCGCGG TCGCCGGCTA TCGCTACGGC 
GACAGGTTCG TCGACCGCCG GTCGGAGGTG GCGGCTATCC GCGAGGCCCT GCCGAACCTG 
GAGCACCTCG TGCACGTGCC CTACGCCGGA GGCGCAAACG ATGCGCTCCC CGGGGCCATC 
GCCTGGGAGG AGCTGCTCTC GGAGGCCGCG CCCCTCGCCT GCGAGCCGGT CGCCTTCGAC 
CACCCCCTCT ACGTACTGTT CTCCTCGGGG ACCACCGGCA AGCCCAAGGC GATAGTCCAC 
GGTCACGGGG GGATCCTCCT CGAGCACCTG AAGAACCTCG GGCTGACCTG GGACCTGCGC 
CCCGGAGATC GGCTAATGTG GTTCACGACC ACCGCCTGGA TGATGTGGAA CGCCCTCGTC 
TCTGCGCTCC TGCTGCGGGC GGCGATCGTC ACGATGGACG GCAACCCGGT CTATCCGGAT 
CTCGCCTTCC AGTGGCGCCT CGCCGAGCGG GTCGGCGCGA CCATGCTGGG CGTCGCCCCG 
GCGTTCCTGA TGGCCTGCCG GAAGGCGGGG CTCGCCGTGG GAAAAAGCTT CGACTTCTCC 
TCTCTGCGGC AGCTGGGGGC CGCTGGCTCC CCGCTGCCCC CGGAGGGCTT CGACTGGGTG 
TACGAGCAGC TCGGTCCGGA CGTGCTGCTG AACATAGGCA GCGGGGGAAC CGACGTGTGC 
ACGGGGATCG TGCAGGGCAG CCCCCTGCAG CCCGTCTATC GCGGAGAGAT CTCGGGCCCC 
TGCCTGGGCG TCGACGCTGC GGCCTTCGAC GAGCGCGGCA GGCCGGTGGT GGGGGAGTTC 
GGAGAGCTGG TGATCCGCTC CCCGATGCCC TCGATGCCGG TCGGCTTCTG GAACGACCCG 
GGCGACAGGC GCTACCGCGC GGCGTACTTC GAGCGCTTCC CCGGCGTCTG GTGTCACGGG 
GATTGGATTC GCTTTGCCGA GCGCGGAAGC TGCGTGATCT CCGGCCGCTC GGATGCGACG 
CTCAACCGGG GAGGGGTTCG CCTCGGCACC GGGGAGATCT ACGCCGTCGT CGAGTCTCTG 
CAGGAGGTGA GGGACAGCCT CGTCGTCCAC CTCGAGGACG ATGAGGGCGG GCCCGGCGAG 
CTGCTGCTGT TCGTGGTCCT CGCGCCGGGC GCCGCGCTCG ACGACGGGCT GCGCGACCGC 
ATCTCCTCCA CCATACGCCG CGAGCTCTCT CCCCGGCATG TCCCCGACAC CATCGAGGCC 
GTGCCCTCCG TTCCCCGCAC GCTCTCCCAG AAGAAGCTCG AGGTGCCGGT CAAACGCATC 
CTTCTCGGGG CCCGCCCCGA CGAGGTGGCG AGCCGGGATT CCCTCCTGGA TCCAACATCC 
CTCGACGCCT ACGCCGCGTA CGCCGCCGGG CGTCGCGAAG GCGCAGGAGA GGGCGGGAGG 
CCGGCCTCCC GATGA 

 

Protein sequence

MGEVLWAPPP DVLEKTEIGR YVRWLRAERG LGFGGYEDLW RWSVEDLEGF WSSIWDFFGV 
RSYTPPQRAL ASREMPGARW FPGARLNYAE RILAPAGDDA RTAIIAHSQS RGPLELTFGE 
LREQVARARA GLLRLGVGPG DRVVAYLPNV PETVVAFLAT ASLGAVWATC APEFGPRSVV 
DRFGQLDPKV LLAVAGYRYG DRFVDRRSEV AAIREALPNL EHLVHVPYAG GANDALPGAI 
AWEELLSEAA PLACEPVAFD HPLYVLFSSG TTGKPKAIVH GHGGILLEHL KNLGLTWDLR 
PGDRLMWFTT TAWMMWNALV SALLLRAAIV TMDGNPVYPD LAFQWRLAER VGATMLGVAP 
AFLMACRKAG LAVGKSFDFS SLRQLGAAGS PLPPEGFDWV YEQLGPDVLL NIGSGGTDVC 
TGIVQGSPLQ PVYRGEISGP CLGVDAAAFD ERGRPVVGEF GELVIRSPMP SMPVGFWNDP 
GDRRYRAAYF ERFPGVWCHG DWIRFAERGS CVISGRSDAT LNRGGVRLGT GEIYAVVESL 
QEVRDSLVVH LEDDEGGPGE LLLFVVLAPG AALDDGLRDR ISSTIRRELS PRHVPDTIEA 
VPSVPRTLSQ KKLEVPVKRI LLGARPDEVA SRDSLLDPTS LDAYAAYAAG RREGAGEGGR 
PASR