| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rxyl_1565 |
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| Symbol | |
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| ID | 4116447 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rubrobacter xylanophilus DSM 9941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008148 |
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| Strand | - |
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| Start bp | 1587349 |
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| End bp | 1588722 |
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| Gene Length | 1374 bp |
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| Protein Length | 457 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 638036362 |
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| Product | aminomethyltransferase |
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| Protein accession | YP_644339 |
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| Protein GI | 108804402 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0404] Glycine cleavage system T protein (aminomethyltransferase) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.287343 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGACCGAC GCAGTCTGGA GGATGTGCTT TCGGAGGCGA AGAGCCCGGT TGAGCTGCTG
CGCAACTCGC AGATAGGGCC CTACGCCTTC CCTGGGGTGC CCGCCGAGTT CACCAACTGG
CGGGACGAGC AGCGGGCGTG GAGGGAGAGC TGCGTGCTCT TCGACCAGTC CTACCACATG
ACCGACCTCT ACATAGAGGG GCCGGACGTG AAGCGGTTGC TCTCCGACCT CGGGATAAAC
AGCTTCGAGG GCTTCAAGAA GAACAACGCC AAGCAGTTCG TCGCGTGCAA CCATGATGGC
TACGTCATAG GCGACGCCAT CCTGTTCGGC CTCGAGGACG ACCGGGTGAG CCTCGTCGGG
CGGCCCACCG CGCACAACTG GGTCCAGTAC CACGCCGAGA GCGGGGACTA CGACGTGAAG
GTCGAGCGGG ACGAGCGGTA CGCGGCGAAC CCCGAGAAGC GCAGGAGGCT TTATCGTTAC
CAGATCCAGG GTCCCAACGC CGCCGAGCTT CTGGAGAAGC TGAACGGCGG GCCGCTCCCG
CAGGTGCCGT TCTTCAGCAT GTACGAGATA AACATCGGCG ACCGCAAGGT GCGGGCGCTG
CGGCACGGGA TGAGCGGCCA GCCGGGCGCC GAGATCTTCG GCCCCTGGGA GGAGCGGGAC
GAGATCAAGG GCATAATCGT GGAGGCGGGC GAGGAGTACG GCCTGAGGCA GGTGGGCTCC
AGAACCTACG CCACCAACAC CCTGGAGTCA GGCTGGATCC CTTCTCCCTG CCCCGCCATC
TACACCGGGG AGGAGATGAA GCCCTACAGG CAGTGGCTGC CCGCAAACGG TTATGAGGCC
ATGGCCTCCC TCGGGGGGAG CTTCTACTCG GAGAGGATAG AGGACTACTA CTTCACCCCC
TACGAGCTGG GCTACGGGCG CTTCGTGAAG TTCGACCACG ACTTTGTGGG CAGGGAGGCG
CTGGAGGAGA TGGCGGATGC TCCGCAGCGC AGGAAGGTGA CGCTGGTGTG GGAGGGGGAG
GATGTGGCCG GCGTCTTTGG GAGCCTCTTC GAGAGGGAGG GGCTTCCCGC AAAGTACATA
GACCTCCCGC TCTCCAACTA CGCCACGCTG CCCTACGACC GGGTGGAGAA GGACGGTCGG
GTCGTGGGGG TCTCCACCTA CACCGGCTAC AGCTACAACG AGCGGGCGAT GCTGTCGCTT
GCGGTGGTGG AGGAGGAGTT CTGCGAGCCT GGGACGGAGG TTGTGCTGTT GTGGGGCGAG
GAGCCCAACA GCTCGAAGCC CACCGTGGAG GAGCACCGGC AGGTGGAGAT AAGGGCGCGG
GTGCAGCCCG CCCCGCTGGT CGAGTTCGCC CGCACCGCCT ACCGCAGCTC GTAG
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| Protein sequence | MDRRSLEDVL SEAKSPVELL RNSQIGPYAF PGVPAEFTNW RDEQRAWRES CVLFDQSYHM
TDLYIEGPDV KRLLSDLGIN SFEGFKKNNA KQFVACNHDG YVIGDAILFG LEDDRVSLVG
RPTAHNWVQY HAESGDYDVK VERDERYAAN PEKRRRLYRY QIQGPNAAEL LEKLNGGPLP
QVPFFSMYEI NIGDRKVRAL RHGMSGQPGA EIFGPWEERD EIKGIIVEAG EEYGLRQVGS
RTYATNTLES GWIPSPCPAI YTGEEMKPYR QWLPANGYEA MASLGGSFYS ERIEDYYFTP
YELGYGRFVK FDHDFVGREA LEEMADAPQR RKVTLVWEGE DVAGVFGSLF EREGLPAKYI
DLPLSNYATL PYDRVEKDGR VVGVSTYTGY SYNERAMLSL AVVEEEFCEP GTEVVLLWGE
EPNSSKPTVE EHRQVEIRAR VQPAPLVEFA RTAYRSS
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