| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rxyl_1560 |
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| Symbol | |
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| ID | 4116890 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rubrobacter xylanophilus DSM 9941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008148 |
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| Strand | + |
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| Start bp | 1580231 |
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| End bp | 1581535 |
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| Gene Length | 1305 bp |
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| Protein Length | 434 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 638036356 |
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| Product | Rieske (2Fe-2S) region |
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| Protein accession | YP_644334 |
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| Protein GI | 108804397 |
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| COG category | [P] Inorganic ion transport and metabolism
[R] General function prediction only |
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| COG ID | [COG4638] Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGACCATCG ATCGAGTGGA CAAGCAGGTG GCTGCTAACC CAAAGCCCAA GACACCGGAG
GACTTCACCA GGGAGGAGAC CTACAGGCTC ACTCGTCTTC CGGTCGAGCT GGCGTCGACC
CTTCTGCCGG AGGCCTACAC CTCTCCTGAG TTCTTTGACA TCGAGAAGGA GCGGGTGTTT
GCCAAGAGTT GGATCCCGGT CGGCTTCGTT TCGCAGGTGC GGGAGCCCGG GCGTACCATC
GTCGCCGAAG TAGCGGGGCG CTCGATCATC ATAGCCCGCG ACAAGTCGGG AAAGCTCAGA
GCCTTTCACA ACGTGTGCCG GCATCGGGCC GCCAGGCTGC TCGACGAGGG CTGCCATGTC
GTCCGCAACA ACAGGATCCG CTGCCCCTAC CACAGCTGGA CCTACGATCT CGAGGGCAAA
TGTTTGGGCA CTCCGCTCTT TGAGGGCTCC GATATCCCGG AGGAGGGACG CACCGCCTTC
GATATGAGCG GGGTTAAAGG CTTCGACAAG GCGGACTACG GGCTCTTGCC CGTCAGGGTG
GACAGCTGGG GCTTTCTCGT CTTTGTCAAC CTTGACCCTG AGACGATCCC GCTCAAAAAA
TACCTAGGCG ACCTGCCGGA GCGCTTCTCC AGCTACCAGC TTGAGGAGTG GCGGGTGGTG
CGGCAAAAGA CCTACGACAT CGCGGCCAAC TACAAGCTAA TCGGCGAAAA CTTCATGGAA
TACTACCACC TGCCATGGGT GCATCCGGAG CTTGTCAAGG TCTCCCGCAT GGAAGATCAC
TATCGATGGC AGGGTCCTGG GATGTACATG GGTTTCTGTA CGACCCCCAT CTCCCAAAAT
ACGGAAGCCG GCGGCTGGCA AGGGCTCCCA CCGATCAGCT CCCTGAGCAA AGAGGAGGCG
GTGAGCGCGC GCTTTATCTG GCTCTTTCCC AACACCGCCG TCAATATCCT GCCCAACCAC
TCCTTCGTGA TGATCACGCG CCCCGACGGG CCAGGACACA CCGTGGAGGA TACCTTCATA
CTCTCTCACC CCGAATCCCT GGCGAACCCC GAAGCCGAAG AAAAGCTGGA CCAGCTGGCG
AGATTCTGGG ATCTGGTAAA CGTGCAGGAC ATCGAGATCG TCGAGCGGGT ACAGCAGGGC
ATCTCCAACC CGGAATACAG GGGTGGGCGC ATGTGCTACC GGTTCGAGGA ACCGCTGCAC
CGCTACCAGA ACATGGTTAT CGATAAGATG GCGGGGATAG AGCGGGTTCC CCCCGGTGAT
GATGAGGAGA TGGTGCGCAT GTTCGACTCC AACACGGACA GTTGA
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| Protein sequence | MTIDRVDKQV AANPKPKTPE DFTREETYRL TRLPVELAST LLPEAYTSPE FFDIEKERVF
AKSWIPVGFV SQVREPGRTI VAEVAGRSII IARDKSGKLR AFHNVCRHRA ARLLDEGCHV
VRNNRIRCPY HSWTYDLEGK CLGTPLFEGS DIPEEGRTAF DMSGVKGFDK ADYGLLPVRV
DSWGFLVFVN LDPETIPLKK YLGDLPERFS SYQLEEWRVV RQKTYDIAAN YKLIGENFME
YYHLPWVHPE LVKVSRMEDH YRWQGPGMYM GFCTTPISQN TEAGGWQGLP PISSLSKEEA
VSARFIWLFP NTAVNILPNH SFVMITRPDG PGHTVEDTFI LSHPESLANP EAEEKLDQLA
RFWDLVNVQD IEIVERVQQG ISNPEYRGGR MCYRFEEPLH RYQNMVIDKM AGIERVPPGD
DEEMVRMFDS NTDS
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