Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rxyl_1553 |
Symbol | |
ID | 4116883 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rubrobacter xylanophilus DSM 9941 |
Kingdom | Bacteria |
Replicon accession | NC_008148 |
Strand | - |
Start bp | 1572492 |
End bp | 1573409 |
Gene Length | 918 bp |
Protein Length | 305 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 638036349 |
Product | LysR family transcriptional regulator |
Protein accession | YP_644327 |
Protein GI | 108804390 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAATTGC GTCAGTTGCG CTACTTCGTT GCTGTTGCCG AAGAACAAAG CTTTGGCGGT GCTGCGAGGC GGCTACGCAT AAGCCAGCCT CCCCTGAGCT TGCAGATCAA AGCTCTGGAA AGAGAGCTTG GCGTGCGGCT TTTTGACCGG AACACCAGGC GCGTCATGCT GACTGATTCG GGACGAGCGT TTCTGGAACG AGCCAGGGTG ATACTGGAGG AGGTCGAGCG GGCGAAAGAG ACGGCAAAGG GCGCTGAGCG GGGGCTATTA GGGAAGCTTG AGGTGGGTTT TGTGAGTTCA GCAACCTTAA GCTTGCTCCC TCCGGCTATC CGCCTCTTCC GCGAGCGGTT CGGTGGAGTG GAGCTCGAGC TCAGAGAGCT GACCAGCGCG CAGCAGATAG ACGCCCTCTA CAACGGCGAG ACAAGGGTAG GGCTGGTACG GTTGCCGCTA CGTGCGCCCG GGATACATCT TGAGCCGGTC TTCGAAGAGC GTCTGGTGGT AGCCCTTCCT TCCGGACATC CTCTGGAAGC GCTCGACCGT GTATCGTTAG AAGCAATAGC TGATCTACCT TTAATCTTCT TTACCCGCCA GCTAATCCCT GGGTTGCATG CGCAGATTAT CGAGCTGTTC CAACGCGTCG GTGCTTTTCC CAATGTGGCC CAGCATGCTG TTCATCTTCA GACGATCGTG GGGCTGGTGG CTAGCGGGGT TGGAATATCC ATCTTGCCCA GTTCGGCTAT GCGGGTGAGG CGTGAGGGCA TCGTCTATCT GCCTCTAGAT GAGGACGATG CTACAAGTTG GTTAGGGCTG GCGTGGGTTG AGGGAGACGA CTCGGTGTTG GTCGAGAACT TTGTCAGCAT CGTACGCGAG GTGGCTCAAA GCGAGGCTCC GCGCGAGTTC AGCCAGGCTC AAGATTAG
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Protein sequence | MELRQLRYFV AVAEEQSFGG AARRLRISQP PLSLQIKALE RELGVRLFDR NTRRVMLTDS GRAFLERARV ILEEVERAKE TAKGAERGLL GKLEVGFVSS ATLSLLPPAI RLFRERFGGV ELELRELTSA QQIDALYNGE TRVGLVRLPL RAPGIHLEPV FEERLVVALP SGHPLEALDR VSLEAIADLP LIFFTRQLIP GLHAQIIELF QRVGAFPNVA QHAVHLQTIV GLVASGVGIS ILPSSAMRVR REGIVYLPLD EDDATSWLGL AWVEGDDSVL VENFVSIVRE VAQSEAPREF SQAQD
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