| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rxyl_1549 |
|---|
| Symbol | |
|---|
| ID | 4116879 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rubrobacter xylanophilus DSM 9941 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008148 |
|---|
| Strand | - |
|---|
| Start bp | 1568803 |
|---|
| End bp | 1569762 |
|---|
| Gene Length | 960 bp |
|---|
| Protein Length | 319 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 638036345 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_644323 |
|---|
| Protein GI | 108804386 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG1131] ABC-type multidrug transport system, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.819341 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAGGAGC TTGCCGCACG GCGCGGCGCG GAGGCGGAGG AGGTCATCCG GATACGGGGG
CTGCGCAAGC GCTACGGGGA CGTCGCCGCG GTGGACGGCG TGGACCTCAC GGTCTACCGG
GGGGAGATCT TCGGCATCCT CGGGCCCAAC GGGGCGGGCA AGACGACGAC GCTGGAGATG
GTCGAGGGCC TGAGGAGGCC CGACGAGGGC GAGATAGAGG TCGCCGGGTA CGACGCCGTG
AGGGAGTCGG GGCGGCTCAA GGGCATCATC GGGGTGCAGC TGCAGACAAC GGCGCTCTTC
GACTACCTCT CCGTGGAGGA GACCCTCGCT CTGTTCTCCG ACCTCTACGG CGTGGGCGGC
TCCAGGAGGG AGCGGGTTCT GCGGCTGCTG GAGATGGTCT CGCTCGCCGA GAAGGGGAGG
GAGCGGGTGA GCCGGCTCTC GGGCGGCCAG CAGCAGCGGC TCTCCATAGC GCTCGCCCTC
GTCAACGACC CGCAGGTGGT CTTTCTGGAC GAGCCGACCA CCGGGCTAGA CCCGCAGGCC
CGGCGCAACC TCTGGGAGAT GGTGCGCGAG ATCCGCGCCC AGGGGCGCAC CGTCGTCCTC
ACCACCCACT ACATGGAGGA GGCCGAGGAG CTGTGCGACA GGGTCGCGGT GATGGACCAC
GGCAGGGTCC TTGTCTGCGA CACGCCGCTC TCCCTGATCC GCTCGCTCGA GGTTGACGCG
ACCGTGCTGG TGACGGTGGA CGGGCGGCCG GACGGCGGCC TGGAGCGCCT GCCGGGCGTG
CGCGGCGTCG AGCGCTCCGG CGGGGACGTG CGGCTGCGCA CCGCCGACGT CCAGGAGACC
ATCATCGGGC TGATGCGCCT CGCCTCGGAG AGGGGCGTGC GGCTGCGCAA CCTCACGGTG
CAGAGCGCGA ACCTCGAGGA CGTGTTCATC TCCTATACGG GAAGGAGCCT GCGCGACTGA
|
|---|
| Protein sequence | MEELAARRGA EAEEVIRIRG LRKRYGDVAA VDGVDLTVYR GEIFGILGPN GAGKTTTLEM
VEGLRRPDEG EIEVAGYDAV RESGRLKGII GVQLQTTALF DYLSVEETLA LFSDLYGVGG
SRRERVLRLL EMVSLAEKGR ERVSRLSGGQ QQRLSIALAL VNDPQVVFLD EPTTGLDPQA
RRNLWEMVRE IRAQGRTVVL TTHYMEEAEE LCDRVAVMDH GRVLVCDTPL SLIRSLEVDA
TVLVTVDGRP DGGLERLPGV RGVERSGGDV RLRTADVQET IIGLMRLASE RGVRLRNLTV
QSANLEDVFI SYTGRSLRD
|
|---|
| |