Gene Rxyl_1530 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRxyl_1530 
Symbol 
ID4116394 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRubrobacter xylanophilus DSM 9941 
KingdomBacteria 
Replicon accessionNC_008148 
Strand- 
Start bp1546603 
End bp1547286 
Gene Length684 bp 
Protein Length227 aa 
Translation table11 
GC content68% 
IMG OID638036325 
ProductDNA repair protein RadC 
Protein accessionYP_644304 
Protein GI108804367 
COG category[L] Replication, recombination and repair 
COG ID[COG2003] DNA repair proteins 
TIGRFAM ID[TIGR00608] DNA repair protein radc 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0606843 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGCCGCC GGTACACCAT AAAGCAGCTC CCGCCCGAGC TCAGGCCCCG CGAGCGGCTT 
CTCGCCGGGG GCGCCTCGGC GCTCTCCGAC GCCGAGCTTC TCGGCGTGCT CTTCGGCATC 
GGGAGCCGGG AGAAGACCGC CGTGGAGCTC GCCGGGGACG TCATCTCCGG GGCCGGGGGG 
CTGCACAACC TCTTCGGCGC CTCCGTGCAC GAGCTCAAGC AGGTAAAGGG CATAGGGGAG 
GCCAAGGCCT GCATCCTGCT CGCCGCGCTC GAGCTCGCCC GGCGCCTGAG CGTCGCTCGC 
AACCCCGGTC GCCCCGTGAT ATCATCGCCG GCGGACGTAG ACGGGCTGTT GAGGGGACGT 
ATAGCCAACC TTGACCGGGA ACACTTCGTG GTCGTGCTTC TGAACACCAA GAACGAGGTG 
ATAGAAGCAC CCACCATCTC GGTCGGGACC CTCTCCTCGT CGCTCGTCCA CCCCCGCGAG 
GTCTTCAAGC CGGCCATCAG GGCCAGCGCC GCGAGCGTGG TGCTCGCCCA CAACCATCCG 
AGCGGCAGGG TGGAGCCCAG CCGCGAGGAC CGGGAGGTGA CCGGGCGCGT CGCGGAGGCC 
GGGGGGATAA TCGGGATAGA GGTTCTCGAC CACGTCATAG TGGGCGAGGG CTACTTCAGC 
ATGAAAGAGC ACGGGATGCT CTAG
 
Protein sequence
MGRRYTIKQL PPELRPRERL LAGGASALSD AELLGVLFGI GSREKTAVEL AGDVISGAGG 
LHNLFGASVH ELKQVKGIGE AKACILLAAL ELARRLSVAR NPGRPVISSP ADVDGLLRGR 
IANLDREHFV VVLLNTKNEV IEAPTISVGT LSSSLVHPRE VFKPAIRASA ASVVLAHNHP 
SGRVEPSRED REVTGRVAEA GGIIGIEVLD HVIVGEGYFS MKEHGML