Gene Rxyl_1528 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRxyl_1528 
Symbol 
ID4116392 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRubrobacter xylanophilus DSM 9941 
KingdomBacteria 
Replicon accessionNC_008148 
Strand
Start bp1544608 
End bp1545528 
Gene Length921 bp 
Protein Length306 aa 
Translation table11 
GC content70% 
IMG OID638036323 
Productrod shape-determining protein MreC 
Protein accessionYP_644302 
Protein GI108804365 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1792] Cell shape-determining protein 
TIGRFAM ID[TIGR00219] rod shape-determining protein MreC 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.187391 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGTCCGTCG GGCGCAAAAA GTCCGGCCCG GCCGGGGGGC TCGCGGCGGT GCTGGCCCTG 
AGCGTCGTGA GCCTGATGCT CTTTACCGTC TACGTGAAGG AGGGGGACTG CACCTCGGAC
AGCGGCTGCG GTCCGCTGCA CACGGTGCAG CTCGGGGCCG CGGAGGTGCT GCGGCCCGTG
CGGGCGCTGC TCTCGCTCGC GGCCTCCCCC TTCGATGTGG CGCAGGACAG GCTGGCCGGG
GCCTTCAGCG GCGAGGAGCA GGAGCTGCGG AGGGAGCTGC GCAACGCCCA GGCGCTCGCC
GCCGAGGCCT CGGATTTGCG CCGGGAGAAC GAGCGGCTTA GGCAGATGCT CGAGGGCGAG
CGGCCCGGCT ACGAGTACGC GCCCCTCGCG CGGGTCATCG CCCCCGTTGG GGAGCAGTTC
ACCAACCGGA TCACCATAAA CGTCGGGACG GAGGACGGCG TGCGGCCGCA GATGCCCGTC
ATAGTGGGGA ACAACATCCT CGTCGGGAGG ACGACCGGGC AGGTCTCCCG GCACACCGCC
GAGGTCATGC TGGTGACCGA CCACAACTTC GCCGCCGGGG TGAGGATCGT TCCGCCGGCG
GAGTTCGACC CCTCCACCGG CCAAGTCGAC CCCTCGGCCA CCGAGGAGGA CGTGACCTAC
GGCGAGGGCA TCCTCAGGAC CAACATCGAG GGCTACTTCG GCGTGGAGTA CGTGGACCTG
AGCGCCCGCG CCGAGGAGGG CGACTACGTC GTCACCAGCG GCCGGGCGGG GGGCAGGGAG
CTTCTGTTCC CGCCGGGGCT CTTCGTGGGC ACGATAGAGT CGGTTAGCTC CACCGACCTC
GACCAGTACA AGAAGATAGT CGTGGAGCCG GCGGTCAACC CGGACGACCT CGAGGAGGTG
CGGGTGATCA CCGATTGGTA G
 
Protein sequence
MSVGRKKSGP AGGLAAVLAL SVVSLMLFTV YVKEGDCTSD SGCGPLHTVQ LGAAEVLRPV 
RALLSLAASP FDVAQDRLAG AFSGEEQELR RELRNAQALA AEASDLRREN ERLRQMLEGE
RPGYEYAPLA RVIAPVGEQF TNRITINVGT EDGVRPQMPV IVGNNILVGR TTGQVSRHTA
EVMLVTDHNF AAGVRIVPPA EFDPSTGQVD PSATEEDVTY GEGILRTNIE GYFGVEYVDL
SARAEEGDYV VTSGRAGGRE LLFPPGLFVG TIESVSSTDL DQYKKIVVEP AVNPDDLEEV
RVITDW