Gene Rxyl_1517 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRxyl_1517 
Symbol 
ID4117061 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRubrobacter xylanophilus DSM 9941 
KingdomBacteria 
Replicon accessionNC_008148 
Strand
Start bp1536594 
End bp1536848 
Gene Length255 bp 
Protein Length84 aa 
Translation table11 
GC content69% 
IMG OID638036311 
ProductSSU ribosomal protein S20P 
Protein accessionYP_644291 
Protein GI108804354 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0268] Ribosomal protein S20 
TIGRFAM ID[TIGR00029] ribosomal protein S20 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.256049 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCCTGCAC CCACCAAGCG CGAGCGGCAG AACAGAAAGC GTTTCGAGCG CAACCGCAGC 
GTGAGGACGC GCCTGCGCAA CCTGTCGAAG AAGTTCTACC GGGCGCTGGA CGCGGGGGAC
CTGGAGAGTG CCCGGAGCGT GAGGGACGAG GCGCAGAAGG CCTACGACAA GGCCGCGGGC
AAGGGGATCA TCCACCGCAA CAAGGCCTCC CGCAAGCTGA GCCGGTTCGA CCGCGCGCTG
GCCGGCAGGG GCTGA
 
Protein sequence
MPAPTKRERQ NRKRFERNRS VRTRLRNLSK KFYRALDAGD LESARSVRDE AQKAYDKAAG 
KGIIHRNKAS RKLSRFDRAL AGRG