| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rxyl_1507 |
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| Symbol | |
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| ID | 4117051 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rubrobacter xylanophilus DSM 9941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008148 |
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| Strand | - |
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| Start bp | 1526525 |
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| End bp | 1526929 |
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| Gene Length | 405 bp |
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| Protein Length | 134 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 638036301 |
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| Product | cytidine deaminase |
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| Protein accession | YP_644281 |
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| Protein GI | 108804344 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0295] Cytidine deaminase |
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| TIGRFAM ID | [TIGR01354] cytidine deaminase, homotetrameric |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.492073 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | TTGCACAACG CGGCTGTCGT GGGCCCGGAG AGGGCGATGC GGGCGGCGAG GGAAGCCGCC
GGACGGGCTT ATGCTCCGTA CAGCGGTTTT CGGGTGGGGG CGGCGCTGGT CACCGGCGAC
GGGGCGCTGT ACTCGGGGTG CAACGTGGAG AACGCCTCCT ACGGCCTCTC CGTCTGCGCC
GAGCGCAACG CGGTGGGGGC CATGGTGCTC GGGGGCGGCG ACCGGAGGAT AGAGTTCGTC
GCGGTTCACA GCCCGCGGGC GGCTCCCTGC CTGCCCTGCG GGGCCTGCAG GCAGGTGCTC
CGGGAGTTCG GGTGCCGGGC GGTGATCGTG GAGGAGGGAG GGGCCCTGCG GGCCTACCCC
TTCGAGGAGA TCCTACCGAA CGCCTTCGGG CCGGAGGACC TCTGA
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| Protein sequence | MHNAAVVGPE RAMRAAREAA GRAYAPYSGF RVGAALVTGD GALYSGCNVE NASYGLSVCA
ERNAVGAMVL GGGDRRIEFV AVHSPRAAPC LPCGACRQVL REFGCRAVIV EEGGALRAYP
FEEILPNAFG PEDL
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