| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rxyl_1495 |
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| Symbol | |
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| ID | 4117019 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rubrobacter xylanophilus DSM 9941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008148 |
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| Strand | - |
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| Start bp | 1513795 |
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| End bp | 1515117 |
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| Gene Length | 1323 bp |
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| Protein Length | 440 aa |
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| Translation table | 11 |
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| GC content | 76% |
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| IMG OID | 638036287 |
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| Product | UDP-N-acetylmuramoylalanine--D-glutamate ligase |
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| Protein accession | YP_644269 |
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| Protein GI | 108804332 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0771] UDP-N-acetylmuramoylalanine-D-glutamate ligase |
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| TIGRFAM ID | [TIGR01087] UDP-N-acetylmuramoylalanine--D-glutamate ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0833766 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGGAGGA CGCTGGTCTA CGGGCTGGGG GAGTCCGGGG AGGCCGCCAC GCGCGCCCTG
CTGCAGCGCG GGGAGCGGCC TCTCGCCGCC GACGCGGCCT CCGGCGAGGG GCCGCGCAGG
GTCCTGGAGG AGCTGGGCGT GGAGGGGGTG CTCGGGGCCG GCCCCGAGGT TCTGGACGGG
GTGGACCGGG TTGTGGTCAG CCCGGGGGTG CGGCCGCGGG ACGCGGTGCT GCGCGAGGCC
CGCAGGCGGG GAATACCGGT CATCTCGGAG GTCGGGCTCG GGCTGGAGCT GCTCGGGCCG
GGGGTGAGGG TCGCCGCCGT CACCGGGACC AACGGGAAGA CCACGGTGGT GGACATGGCG
CGGCACATCC TGCGGGTCGC GGGGGTGGCG CACGCGGTCG CCGGGAACTC CTGGCGGGCG
CTCACGGGGT GCCTCGAGGA GGTGCGGAGG GCCGGGGTGC TGGTGCTCGA GGTCTCCTCC
TTCCAGCTGC ACCACCTGCC GCCCCCGGGC TTCGAGGTGG CCGCCCTGCT GAACGTCCGG
CCCGACCACC TGAACTGGCA CTCCTCCTTC GAGGAGTACG CGCGCGACAA GCTCCGCGTC
TTCGGGGGGC AGGGGCCCGG CGACCTGGCG CTCCTCTCGG CCGACGACCC GATCTGCCGG
CGGGCGGCGG GGGGGCTCCG GGCCGAGGTC GTCCTGGTCG GGGAGGGCGA GACCGGGGTG
CGGGACGGCA GGCTCCTGCT GCGGGGCGAG TTCCTGGCCG GCGAGCGGGA GCTGGGCTTC
GCCGGCGGCC ACAACCTGAA GAACGCCCTC TTCGCCGCCG CGGCGGCGGC GAGGCTCGGG
GCGGGGCTCG AGGCCATCCG GGAGGCGCTC CGCGGCTACC GGCTCAAGCC GCACCGGATG
CAGGTCGTGG CGGAGGAGGG CGGGGTGACC TACATAGACG ACTCCAAGGC CACCAACCCG
GCCGCGGTCG CCGCGGCGCT GCTGAGCCTC GGCGGCCGGC CCGCGGTGCT CATCCTGGGC
GGCTCCGAGA AGGAGACCGA CTTTGAGGAG GTGCTCCCAC ACCTGGGGGG GTGCCGGGCG
GTGGTCTGCC AGGGGGAGGC CGGTCCGCGG CTGCGAGACT TTCTCTCGGA GCGGTGGGGC
GGCGAGGTGG TGCTCGCCGG GGATCTCGCC TCCGCCGTCG AGGCGGCGCG GCGCCTGGCC
AGGCCCGGGG ATGCGGTCCT GCTCTCGCCC GGGTGCGCCA GCTTCGACCA GTTCTCCGGC
TACGAGGAGC GGGGCGAGGC CTTCGCCCGG CTCGCCGGCG GGCGGAGGGC GGTCCGTGGA
TGA
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| Protein sequence | MRRTLVYGLG ESGEAATRAL LQRGERPLAA DAASGEGPRR VLEELGVEGV LGAGPEVLDG
VDRVVVSPGV RPRDAVLREA RRRGIPVISE VGLGLELLGP GVRVAAVTGT NGKTTVVDMA
RHILRVAGVA HAVAGNSWRA LTGCLEEVRR AGVLVLEVSS FQLHHLPPPG FEVAALLNVR
PDHLNWHSSF EEYARDKLRV FGGQGPGDLA LLSADDPICR RAAGGLRAEV VLVGEGETGV
RDGRLLLRGE FLAGERELGF AGGHNLKNAL FAAAAAARLG AGLEAIREAL RGYRLKPHRM
QVVAEEGGVT YIDDSKATNP AAVAAALLSL GGRPAVLILG GSEKETDFEE VLPHLGGCRA
VVCQGEAGPR LRDFLSERWG GEVVLAGDLA SAVEAARRLA RPGDAVLLSP GCASFDQFSG
YEERGEAFAR LAGGRRAVRG
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