Gene Rxyl_1493 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRxyl_1493 
Symbol 
ID4117017 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRubrobacter xylanophilus DSM 9941 
KingdomBacteria 
Replicon accessionNC_008148 
Strand
Start bp1511647 
End bp1512657 
Gene Length1011 bp 
Protein Length336 aa 
Translation table11 
GC content75% 
IMG OID638036285 
ProductUDP-N-acetylglucosamine--N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase 
Protein accessionYP_644267 
Protein GI108804330 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0707] UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase 
TIGRFAM ID[TIGR01133] undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0427088 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGCTGAGA GCCTGCGCGA GCGGGGGGCG GAGGTGGTCT TTTTCGGCTC CGAGTCCGGG 
CTCGAGCGCG AGCTGGTGCC GAAGGCGGGG TTTGGCCTCC ATGCCCTCCC GCTGTCCGGG
CTGGCCGGCG GGCCGGCGAG CCGCGCCCGG GCCTCGCTGC TCTTCGCGCG GGCGGTGGTC
CGCTGCCGCG CCCTGCTGCG CGAGCTGCGG CCGGGGGCGG TGCTCGGCGT GGGGGGCTAC
GCCAGCGCCC CGGCGGTCGC GGCGGCGCGC CTGCTCGGCA TCCCGACCTT TATCCACGAG
CAGAACTCCG TGCCCGGGAA GGTCAACCGC GCCGCCGGGC GCTTCGCGAG GGAGGTGCTG
GTCGCCTTCC CGGACGCCGC GCGCCGCTTC GGCCGGGCGG TGCGGGCGGC GCACGTCGGG
ATGCCCACCA GGCGGCAGTT CTTCTCGGCC TCGCGGGAGG AGGCCCTGCG GCGGCTCGGG
CTGGAGCCGC CGGTGGTGCT GGTCTTCGGC GGCAGCGGGG GAGCGCTCAG GATAAACCTC
GCCGCCGCCG AGGCCTTCCG GGGCCAGACC CCGTACTCCG TGGTCCAGAT CTCGGGCCGC
AGGGACTTCC CGCGCCTCTC GAGCGACAAC CCCCGCCACC GCATCCTGGA GTACGCGGAG
GACATCTGGC ACCACGTGAC GGCGGCGGAC GTCGTCGTGA TCCGGGGCGG CGCGGGGTCC
CTCTTCGACG TGGCCGCGGT CGGGAGGGCC GCGATCGTGG TACCTTATCC GCACCACCGG
GACAACCAGC AGCTGCTGAA CGCCCGCTAC TTCACCGAGA GGGGGGCGGC GGAGCTGCTT
CCGGACCACG AGGTAGACGC CAAGACGCTG CGCGGCCGCG TGGAGGAGCT TCTCGGCGAC
GGGGAGCGGA GGCTCCGCAT GGCCTCCTCG ATGCGCTCGC TCGCCACCCC GCGCGCCGCG
GAGGAGGTCG CGGAGAGGAT GCTTGCGGCC GGAAGGGAGG GGACAGGTTG A
 
Protein sequence
MAESLRERGA EVVFFGSESG LERELVPKAG FGLHALPLSG LAGGPASRAR ASLLFARAVV 
RCRALLRELR PGAVLGVGGY ASAPAVAAAR LLGIPTFIHE QNSVPGKVNR AAGRFAREVL
VAFPDAARRF GRAVRAAHVG MPTRRQFFSA SREEALRRLG LEPPVVLVFG GSGGALRINL
AAAEAFRGQT PYSVVQISGR RDFPRLSSDN PRHRILEYAE DIWHHVTAAD VVVIRGGAGS
LFDVAAVGRA AIVVPYPHHR DNQQLLNARY FTERGAAELL PDHEVDAKTL RGRVEELLGD
GERRLRMASS MRSLATPRAA EEVAERMLAA GREGTG