Gene Rxyl_1485 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRxyl_1485 
Symbol 
ID4117009 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRubrobacter xylanophilus DSM 9941 
KingdomBacteria 
Replicon accessionNC_008148 
Strand
Start bp1504434 
End bp1505222 
Gene Length789 bp 
Protein Length262 aa 
Translation table11 
GC content73% 
IMG OID638036277 
Productpyrroline-5-carboxylate reductase 
Protein accessionYP_644259 
Protein GI108804322 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0345] Pyrroline-5-carboxylate reductase 
TIGRFAM ID[TIGR00112] pyrroline-5-carboxylate reductase 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.478793 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAGGCGCG TAGGGGTAAT AGGGGCGGGC AAGATCGGGG GCTCCCTCCT GAGCCGGCTG 
GCCGAGTCGG GGGACTTCGA GCTGGCCGTG AGCGACGTCC ACCCCGAGCA GGTTGAGCGC
TTCCGGCGCT ACGACCGGGT GCGCCCGGCC TCCTCCAACC TCGAGCTCGC GGAGGCGAGC
GAGATCGTGA TCGTGGCCGT AAAGCCCTGG GACGTGGCCG GGGTGCTCGA GGAGATCTCG
CCCGCCATGG GCTCCGGGGG GCGCTCGGTG ACCAGCGTCG CTGCGGGGGT GGAGATCAGG
ACCATCGAGT CCTACCTGCC GGAGGGCACG CCGGTGCTCC GGGTGATGCC CAACGTGTGC
GCCTCGGTGG GGCTCGGCGC CGCCGTGATC ACCGCGAACG AGCCCGGCCG GCGGGTGCTG
CCCGAGGTGA TGGACATCTT CGGGCGGGTG GGCGAGGTGA TGGAGCTGCC CGAGCGCCTC
TTCGACGCGG CCACCGCGCT GCACGGCTCG GGACCGGCCT ACGTGGCGCT CTTCGCCGAC
GCCCTCATCC AGGCCGGGGT TCGGGAGGGG CTGCCGCGGG AGGTTGCGCG CAGGCTGGTG
GTGGGCACCC TCGCCGGGAC CGCCGTGCTG CTCAAGGACC GGAGCGCCCA CCAGGTGCGC
GACGAGGTGA TGACCCCCGG CGGCACCACG GCGGCGGCCT TCGTGGCCAT GGAGAAGGCC
GGTTTCGTGG GCGCGGTCTA CGACGGGGTC AACGCCGCCA CCCGGCGGGC CCGGGAGCTC
GGCGGATGA
 
Protein sequence
MRRVGVIGAG KIGGSLLSRL AESGDFELAV SDVHPEQVER FRRYDRVRPA SSNLELAEAS 
EIVIVAVKPW DVAGVLEEIS PAMGSGGRSV TSVAAGVEIR TIESYLPEGT PVLRVMPNVC
ASVGLGAAVI TANEPGRRVL PEVMDIFGRV GEVMELPERL FDAATALHGS GPAYVALFAD
ALIQAGVREG LPREVARRLV VGTLAGTAVL LKDRSAHQVR DEVMTPGGTT AAAFVAMEKA
GFVGAVYDGV NAATRRAREL GG