Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rxyl_1482 |
Symbol | |
ID | 4116148 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rubrobacter xylanophilus DSM 9941 |
Kingdom | Bacteria |
Replicon accession | NC_008148 |
Strand | - |
Start bp | 1502280 |
End bp | 1503197 |
Gene Length | 918 bp |
Protein Length | 305 aa |
Translation table | 11 |
GC content | 76% |
IMG OID | 638036274 |
Product | ribosomal large subunit pseudouridine synthase D |
Protein accession | YP_644256 |
Protein GI | 108804319 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.696906 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGTGGGGG AGTCTTTCCG CGTCTCTCCC TCCGAGGCCG GGGAGCGGCT CGACCGCCTG CTCGCCCGGC GCCTCGGGAT CAGCCGCAGC CGGGCGCAGC GGCTGCTGGC CGAGGGGCTC GCCCGGGTCG GCGGTGAGGC GGCGGCCCCG TCCCTCAGGG TGCGGGGGGG CGAGGTGGTC GAGGCGCGGC TGCCCGAGGA GGGGCTCGAG GCCGAGGAGA TCCCGGTTCC CATCCTCTTC GAGGACGAGC ACATCGCCGT CGTGGACAAG CCCGCCGGGA TGGTGGTGCA CCCCGGGGCC GGGAACCGCT CCGGGACGCT GGTCAACGCG CTGCTCGGGC GCGGCATAGC GGGGGGGGAG GACCCCGAGC GGCCGGGCAT CGTGCACCGC CTCGACCGGG ACACCTCCGG CCTGATGGTC GTGGCGAAGG GCGAGCCCGC CTACTCGCGG CTCGTGGAGA TGCTGGCCGC CCGGCGGGTG CGGAGGGTCT ACCGGGCGCT CGTGGTCGGC GAGGGGCTGC CGCCCTCCGG CACGGTGGAC TCCCCGGTGG GGAGGGACCC GGAGAACCCG GCGCTCATGG CCGCGGGCGT CGGCCGGCCG GCGGTGACCC ACTTCGAGGT GCTCGGGGAG GCCGCCGGGC ACACCATGCT GCGGGTGCGC CTGGAGACGG GGAGGACGCA CCAGATCCGG GTGCACCTCT CGGCCATAGG GTATCCCGTC TACGCCGACC CGCTCTACGG CCGGGCCGTG CCGGGCAGGA GGCTGTGGCT GCACGCCGAG CGGCTCTCCT TCGAGCACCC GGCGGAGGGG AGGCCGCTGG ACTTCTTCTC CCCCGTCCCG GAGGAGCTGC GCCGGGCGGC CGCGGAGCTC GACGCGCGCT TCGAGGAGCT TCTTGACGGC CCGGCGGCTC TCTGGTAG
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Protein sequence | MVGESFRVSP SEAGERLDRL LARRLGISRS RAQRLLAEGL ARVGGEAAAP SLRVRGGEVV EARLPEEGLE AEEIPVPILF EDEHIAVVDK PAGMVVHPGA GNRSGTLVNA LLGRGIAGGE DPERPGIVHR LDRDTSGLMV VAKGEPAYSR LVEMLAARRV RRVYRALVVG EGLPPSGTVD SPVGRDPENP ALMAAGVGRP AVTHFEVLGE AAGHTMLRVR LETGRTHQIR VHLSAIGYPV YADPLYGRAV PGRRLWLHAE RLSFEHPAEG RPLDFFSPVP EELRRAAAEL DARFEELLDG PAALW
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