| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rxyl_1477 |
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| Symbol | |
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| ID | 4116143 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rubrobacter xylanophilus DSM 9941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008148 |
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| Strand | - |
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| Start bp | 1495174 |
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| End bp | 1498338 |
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| Gene Length | 3165 bp |
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| Protein Length | 1054 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 638036269 |
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| Product | carbamoyl-phosphate synthase large subunit |
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| Protein accession | YP_644251 |
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| Protein GI | 108804314 |
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| COG category | [E] Amino acid transport and metabolism
[F] Nucleotide transport and metabolism
[I] Lipid transport and metabolism |
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| COG ID | [COG0458] Carbamoylphosphate synthase large subunit (split gene in MJ)
[COG4770] Acetyl/propionyl-CoA carboxylase, alpha subunit |
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| TIGRFAM ID | [TIGR01369] carbamoyl-phosphate synthase, large subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.438417 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGCCGCGCC GGGACGATAT AAGGAGCATC CTGATCATCG GGTCGGGGCC GATCGTGATC
GGCCAGGCCG CCGAGTTCGA CTACTCCGGC ACCCAGGCCT GCCGGGCCCT GAAGGAGGAG
GGCTACCGGG TCATCCTGGT GAACTCCAAC CCAGCCACGA TCATGACCGA CCCGGAGATG
GCGGACACCA CCTACATCGA GCCCCTGCGG GCCGAGACGG TGGCGGAGGT CATCCGCCGC
GAGCGCCCCG ACGCCCTGCT GCCGACGCTC GGCGGCCAGA CGGCCCTTAA CCTGGCGGTG
GAGCTGTCGG AGGCGGGCGT CCTGGAGGAG TACGGGGTGC AGCTCCTCGG GGCCTCCATA
CCGTCCATCC AGAAGGCCGA GGACCGCCAG CTCTTCCGGG AGGCGATGGA GCGGATCGGG
CTGCGGGTCC CCGAGAGCCG CACCGTCCGC TCGGTCCCGG AGGCCGAGGA GCTGGCCGAG
AGGATCGGCT TCCCCCTCAT CATCCGGCCG AGCTTCACCC TCGGCGGCAC CGGCGGCTCG
GTGGCCGAAG ACCTCGACGC CCTGCGCGCC TCCGTGCGCG ACGGCCTCGA CGCCAGCCCC
GTGCGGAGCG TCCTCGTCGA GCGCTCCGTC GCGGGCTGGA AGGAGTTCGA GCTCGAGGTC
ATGCGCGACC TCGCAGATAA CGTCGTCATC GTCTGCTCCA TCGAGAACGT GGACCCCATG
GGCGTCCACA CCGGCGACTC CATCACCGTC GCCCCCGCCC AGACCCTCTC CGACCGCCAG
TACCAGAGCC TCCGCACCGC CGCTATACGC ATAATACGCG AGATCGGGGT TTCCACGGGG
GGCTCCAACA TACAGTTTGC GGTGAACCCC GAGGGGGACG ACTTCTACGT CATCGAGATG
AACCCGCGGG TGAGCCGGTC GAGCGCGCTG GCGAGCAAGG CCACGGGCTT TCCGATAGCC
AAGATAGCGG CGCGTCTGGC GGTGGGGTAC ACGCTGGACG AGATCACCAA CGACATCACG
GGGGCCACCC CGGCGTCCTT CGAGCCGGCG CTGGACTATG TGGTGACCAA GATCCCGCGC
TTTGCGTTCG AGAAGTTCCC CGGCACCTCG GCGCGGCTGA CGACCCGGAT GCACTCGGTG
GGCGAGGTGA TGGCCATCGG GAGGACGTTC ACCGAGAGCC TGCTCAAGGC GATGGCCTCG
CTGGAGATCG AGACGCGGGA CATCCAGGCC AGGCTGGACG AGCCCTCGCC CTACAGGATC
TTCGCGGTCT TCGAGGCGCT CAGGGCCGGG ATGGACATCC CGGAGATCTA CCGCCGGACC
AGCATAGACC CGTTCTTCAT CGCGGCGGCG GCCCGGATCG TGGCCGCCGA GGGGGCGGTG
GAGGAGACCC TGAGCGCCGA GCAGGTGCGG GAGCTGAAGA GGATGGGCTT CACCGACGAG
GCGCTGGCGG CCTGCTCCGG CTACCCGGCG GAGGTGGTGC GGGGCGTCCG GCGGGCGCTG
GGGGTGCACC CCACCTACAA GGCCGTGGAC ACCTGCGCCG GGGAGTTTCC GGCCCGCACC
CCCTACTACT ACTCCACCTA CGAGCAGGAG GACGAGGTGG AGCGGGGCGA GAACCCCTCC
GTGGTCGTCC TCGGCAGCGG CCCCAACAGG ATCGGGCAGG GGATAGAGTT CGACTACGCC
TGCGTCCACG CCAGCTACGA GCTGAAGGCC TGCGGCTACG ACGCCGTCAT GATCAACTCC
AACCCCGAGA CGGTCTCCAC CGACTACGAC ACCTCCAGCC GGCTGTACTT CGAGCCGCTG
ACCGCCGAGC ACGTGCTGGA GGTCGTCCGG CGCGAGAGGC CGGAGGGCGT GATCCTCCAG
TTCGGCGGCC AGAGCCCGCT GAAGCTGGCC CGCGAGCTGG AGCGGGCCGG CGCGCGGGTG
CTCGGTACCT CCCCCGAGGC CATAGACCTC GCCGAGGACC GCTCCCGCTT CGGGCGCCTG
CTCCGGGAGC TCGGCATACC CCACCCGCGC TTCGGCACCG CCACCACCGC CGCCGAGGCC
CGGGAGGTCG CCCGCCGGCT CGGCTACCCC GTGGTCGTCC GCCCCTCCTA CGTGCTCGGC
GGCCGCAGGA TGGAGATCGT CTACGGCGAC GAAGACCTCG AGCTCTACCT GAGGTCCAGC
GTAAGCGGGA GCCCGGAGCA CCCGATCCTC GTGGACAAGT TCATGGAGGC TTACGTGGAG
GTAGACGTCG ACGCCGTCTC CGACGGGGAG GAGGTGTACA TCGGCGGGAT CATGGAGCAC
ATAGAGGAGG CCGGGGTGCA CTCTGGGGAC TCCTCGTGCG TGACGCCGCC GATCACGCTC
ACCCGGTCGC TGCAGGAGAG GATCGAGGAC TACACCCGGC GGCTGGCCCT CTCCATCGGG
GTGGTGGGGC TGATGAACGT GCAGTACGTG GTGCGGGGCG ACGAGGTGAT GGCCATCGAG
TGCAACCCGC GGGCCTCGCG GACCGTGCCG TACATCTCCA AGGCCACGGG GGTGCCCCTG
GCGCGGCTGG CGACGCGGGT GCTGCTCGGG GAGAAGCTCC GCGACCTCGG GCCCCGGCCC
GCCTCCAGCG GGAGCTTCGC GGTCAAGGCC CCCGTCTTCC CCTTCGACCG CTTCGCCGAG
GTGGACCCGC TGCTCGGGCC CGAGATGCGC TCCACCGGCG AGGCGATGGG GATAGACCCC
ACCTTCGGGG GGGCGTTTGC CAAGGCGCTC GCCGCCGCGG GGCAGCGGCT GCCCGAGTCC
GGGCGGGTCT ACGTCTCCGT CGCCGACCGG GACAAGCGGG CGGCGGTGCT CATCGCGCGG
GGGTTCGCGG ACCTCGGGTT CGAGGTTCTG GCGAGCGAGG GCACCGCGGG GGTGCTCAGG
AACAACGGGC TCCCGGCGGC GGTGGTGCCC AAGATCGGGG AGGGCGGCGA GGACGTGCTC
GGGCTCATCG AGAGGGGCGG GGTGGACCTG ATCGTCAACA CGCCCTGGGG GCGCGGCTCG
CGCACGGACG GGTACCTGAT CCGCCGCAAG GCCCTGATGC ACCGGGTGCC GTGCATCACC
ACGCTGGCCG GGGCGGCCGC CGCCCTGCAG GGGATAGAGG CCAGGATCAG GGGGGAGACC
CGGCGGGTGC ACTCCCTGCA GGACCTGTAC GCGGCCCGAA CGTGA
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| Protein sequence | MPRRDDIRSI LIIGSGPIVI GQAAEFDYSG TQACRALKEE GYRVILVNSN PATIMTDPEM
ADTTYIEPLR AETVAEVIRR ERPDALLPTL GGQTALNLAV ELSEAGVLEE YGVQLLGASI
PSIQKAEDRQ LFREAMERIG LRVPESRTVR SVPEAEELAE RIGFPLIIRP SFTLGGTGGS
VAEDLDALRA SVRDGLDASP VRSVLVERSV AGWKEFELEV MRDLADNVVI VCSIENVDPM
GVHTGDSITV APAQTLSDRQ YQSLRTAAIR IIREIGVSTG GSNIQFAVNP EGDDFYVIEM
NPRVSRSSAL ASKATGFPIA KIAARLAVGY TLDEITNDIT GATPASFEPA LDYVVTKIPR
FAFEKFPGTS ARLTTRMHSV GEVMAIGRTF TESLLKAMAS LEIETRDIQA RLDEPSPYRI
FAVFEALRAG MDIPEIYRRT SIDPFFIAAA ARIVAAEGAV EETLSAEQVR ELKRMGFTDE
ALAACSGYPA EVVRGVRRAL GVHPTYKAVD TCAGEFPART PYYYSTYEQE DEVERGENPS
VVVLGSGPNR IGQGIEFDYA CVHASYELKA CGYDAVMINS NPETVSTDYD TSSRLYFEPL
TAEHVLEVVR RERPEGVILQ FGGQSPLKLA RELERAGARV LGTSPEAIDL AEDRSRFGRL
LRELGIPHPR FGTATTAAEA REVARRLGYP VVVRPSYVLG GRRMEIVYGD EDLELYLRSS
VSGSPEHPIL VDKFMEAYVE VDVDAVSDGE EVYIGGIMEH IEEAGVHSGD SSCVTPPITL
TRSLQERIED YTRRLALSIG VVGLMNVQYV VRGDEVMAIE CNPRASRTVP YISKATGVPL
ARLATRVLLG EKLRDLGPRP ASSGSFAVKA PVFPFDRFAE VDPLLGPEMR STGEAMGIDP
TFGGAFAKAL AAAGQRLPES GRVYVSVADR DKRAAVLIAR GFADLGFEVL ASEGTAGVLR
NNGLPAAVVP KIGEGGEDVL GLIERGGVDL IVNTPWGRGS RTDGYLIRRK ALMHRVPCIT
TLAGAAAALQ GIEARIRGET RRVHSLQDLY AART
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