Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rxyl_1456 |
Symbol | |
ID | 4116805 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rubrobacter xylanophilus DSM 9941 |
Kingdom | Bacteria |
Replicon accession | NC_008148 |
Strand | - |
Start bp | 1477863 |
End bp | 1478762 |
Gene Length | 900 bp |
Protein Length | 299 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 638036248 |
Product | farnesyl-diphosphate synthase |
Protein accession | YP_644230 |
Protein GI | 108804293 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0142] Geranylgeranyl pyrophosphate synthase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.292762 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAGAACC TGGCTAGCGC CGGGCGCTGG GAGCGGCACC GGAGGATCTT CGAGGAGTAC CTGGAGGGGC TGCGCTTCAC CGAAGAGCCC GCCCTCGAGC GGCTGCAGGA GGCGATGCGC TACTCGCTGC TTGCCGGGGG AAAGCGCGTG AGGCCCCTCC TCTGCATGGA GAGCGCCCGC CTCTTCGGCG CTCCCCCGGA GAGGGTGCTC CCCTCCGCCG CCGCCATAGA GCTGATCCAC ACCTACTCCC TCATCCACGA CGACCTTCCC GCGATGGACA ACGACGACTT CCGCAGGGGC AGGCCCACCA GCCACAAGAA GTTCGGGGAG GCGATGGCCA TCCTGGCGGG CGACGCCTTC TTCGGGGAGG CGCTCACGCT CATCACCGTC AGGCAGGAGG GCACCTGCGA GCAGCGGCTC GGGGTGGTGC AGGAGCTCGC GAGCTCCACC GGCGTCAACG GCATGGTCGG CGGGCAGGTG CTCGACATGG ACCAGACCGG GGCGGGCGGG AGCGCCGACC CCGGGATGCT GTTCATGATC CACCGCTACA AGACCGGCGC GCTCATAAGG TCCAGCGCGC GGGTGGGCGC CATCCTGGCC GGGGCGGGCG AGGAGGGGCT CGAGGCCATC TCGCGGTACG CCACGGAGCT TGGGCTGTGC TTCCAGATAG TGGATGACGT GCTGGACGCG GTGGGCAGCA GCGAGCGGCT GGGCAAGCGG GCCGGGGGGG ACGCCGAGCG GGGCAAGGCC ACGTTTGTGA GCGTGTTTGG GCTCGAGGGG GCCAGGAGGG AGGCCGACGC CGCCTGCGAG CGGGCGCTGC GGGCGCTCGG GCGCCTGGAA GGCCGGGACA CCTCCGCCCT CGGGGAGCTC GCGCTCTTCG TCCGCCACCG GGGGAGCTAG
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Protein sequence | MENLASAGRW ERHRRIFEEY LEGLRFTEEP ALERLQEAMR YSLLAGGKRV RPLLCMESAR LFGAPPERVL PSAAAIELIH TYSLIHDDLP AMDNDDFRRG RPTSHKKFGE AMAILAGDAF FGEALTLITV RQEGTCEQRL GVVQELASST GVNGMVGGQV LDMDQTGAGG SADPGMLFMI HRYKTGALIR SSARVGAILA GAGEEGLEAI SRYATELGLC FQIVDDVLDA VGSSERLGKR AGGDAERGKA TFVSVFGLEG ARREADAACE RALRALGRLE GRDTSALGEL ALFVRHRGS
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