Gene Rxyl_1456 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRxyl_1456 
Symbol 
ID4116805 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRubrobacter xylanophilus DSM 9941 
KingdomBacteria 
Replicon accessionNC_008148 
Strand
Start bp1477863 
End bp1478762 
Gene Length900 bp 
Protein Length299 aa 
Translation table11 
GC content71% 
IMG OID638036248 
Productfarnesyl-diphosphate synthase 
Protein accessionYP_644230 
Protein GI108804293 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0142] Geranylgeranyl pyrophosphate synthase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.292762 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAGAACC TGGCTAGCGC CGGGCGCTGG GAGCGGCACC GGAGGATCTT CGAGGAGTAC 
CTGGAGGGGC TGCGCTTCAC CGAAGAGCCC GCCCTCGAGC GGCTGCAGGA GGCGATGCGC
TACTCGCTGC TTGCCGGGGG AAAGCGCGTG AGGCCCCTCC TCTGCATGGA GAGCGCCCGC
CTCTTCGGCG CTCCCCCGGA GAGGGTGCTC CCCTCCGCCG CCGCCATAGA GCTGATCCAC
ACCTACTCCC TCATCCACGA CGACCTTCCC GCGATGGACA ACGACGACTT CCGCAGGGGC
AGGCCCACCA GCCACAAGAA GTTCGGGGAG GCGATGGCCA TCCTGGCGGG CGACGCCTTC
TTCGGGGAGG CGCTCACGCT CATCACCGTC AGGCAGGAGG GCACCTGCGA GCAGCGGCTC
GGGGTGGTGC AGGAGCTCGC GAGCTCCACC GGCGTCAACG GCATGGTCGG CGGGCAGGTG
CTCGACATGG ACCAGACCGG GGCGGGCGGG AGCGCCGACC CCGGGATGCT GTTCATGATC
CACCGCTACA AGACCGGCGC GCTCATAAGG TCCAGCGCGC GGGTGGGCGC CATCCTGGCC
GGGGCGGGCG AGGAGGGGCT CGAGGCCATC TCGCGGTACG CCACGGAGCT TGGGCTGTGC
TTCCAGATAG TGGATGACGT GCTGGACGCG GTGGGCAGCA GCGAGCGGCT GGGCAAGCGG
GCCGGGGGGG ACGCCGAGCG GGGCAAGGCC ACGTTTGTGA GCGTGTTTGG GCTCGAGGGG
GCCAGGAGGG AGGCCGACGC CGCCTGCGAG CGGGCGCTGC GGGCGCTCGG GCGCCTGGAA
GGCCGGGACA CCTCCGCCCT CGGGGAGCTC GCGCTCTTCG TCCGCCACCG GGGGAGCTAG
 
Protein sequence
MENLASAGRW ERHRRIFEEY LEGLRFTEEP ALERLQEAMR YSLLAGGKRV RPLLCMESAR 
LFGAPPERVL PSAAAIELIH TYSLIHDDLP AMDNDDFRRG RPTSHKKFGE AMAILAGDAF
FGEALTLITV RQEGTCEQRL GVVQELASST GVNGMVGGQV LDMDQTGAGG SADPGMLFMI
HRYKTGALIR SSARVGAILA GAGEEGLEAI SRYATELGLC FQIVDDVLDA VGSSERLGKR
AGGDAERGKA TFVSVFGLEG ARREADAACE RALRALGRLE GRDTSALGEL ALFVRHRGS