Gene Rxyl_1455 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRxyl_1455 
Symbol 
ID4116804 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRubrobacter xylanophilus DSM 9941 
KingdomBacteria 
Replicon accessionNC_008148 
Strand
Start bp1477059 
End bp1477856 
Gene Length798 bp 
Protein Length265 aa 
Translation table11 
GC content76% 
IMG OID638036247 
Producthemolysin A 
Protein accessionYP_644229 
Protein GI108804292 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1189] Predicted rRNA methylase 
TIGRFAM ID[TIGR00478] hemolysin TlyA family protein 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0732885 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGTCCGGCG GGAGGCGCCT CGACGCCATC CTCGTGGAGC GCGGGCTGGC CGAGACCCGC 
TCCCGGGCGC AGGCCATGAT CCTGGCGGGC CGGGTGCGGG TGGGGGACCG GGTGGTGACC
AAGGCCGGCT TCCGGCCGGC CCCGGGGGAG GAGGTGCGCC TCGTCGCGCC CGAGCGGCCC
TTCGTCTCCC GCGGCGGGGA GAAGCTCGCG GCGGCGCTGG AGCGCTTCGG GGTGGAGGTG
GAGGGGAGGC TGTGCCTGGA TGCCGGGGCT TCCACCGGGG GCTTCACCGA CGTGCTGCTG
CGGCGGGGGG CGCGGCGCAT CATCGCGGTG GACGTGGGCT ACGGGCAGCT GGACTGGCGG
CTGCGGGAGG ATCCCCGCGT GGAGGTGATG GAGCGGACCA ACGTGCGGCA CCTCGGGGCA
AAGGATCTGC CCTTTGCCCC GGAGCTCGTG GTCGCCGACC TCTCCTTCAT CTCCGTGGTG
CTCGCGCTCT CCGGGCTCCT GCGGAGCGCG GGCTCCGTGC GGGAGGCCGT GGTGCTGGTC
AAGCCGCAGT TCGAGGTCGG GCCCGAACGG GTCTCCAGGG GCGGGGTGGT GCGCGACCCG
GAGGCGCGGG CCGAGGCCAT CCTGCGGGCG GCGGAGGGCT TCGGGCGGCT CGGCTTCGGG
GCGGTGGGGG TGATGGAGTC CCCGGTGGCC GGGAGGCGCT CGGGCAACCG GGAGTACCTG
CTGCACCTGC TCAAGGGCGC GGAGGCCGCG GTGGGACCCG AGGAGGCCCG GGAGGTGGCC
GGTGGCGCCC CCTTCTAG
 
Protein sequence
MSGGRRLDAI LVERGLAETR SRAQAMILAG RVRVGDRVVT KAGFRPAPGE EVRLVAPERP 
FVSRGGEKLA AALERFGVEV EGRLCLDAGA STGGFTDVLL RRGARRIIAV DVGYGQLDWR
LREDPRVEVM ERTNVRHLGA KDLPFAPELV VADLSFISVV LALSGLLRSA GSVREAVVLV
KPQFEVGPER VSRGGVVRDP EARAEAILRA AEGFGRLGFG AVGVMESPVA GRRSGNREYL
LHLLKGAEAA VGPEEAREVA GGAPF