| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rxyl_1441 |
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| Symbol | |
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| ID | 4117239 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rubrobacter xylanophilus DSM 9941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008148 |
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| Strand | - |
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| Start bp | 1463496 |
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| End bp | 1464839 |
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| Gene Length | 1344 bp |
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| Protein Length | 447 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 638036233 |
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| Product | 3-phosphoshikimate 1-carboxyvinyltransferase |
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| Protein accession | YP_644215 |
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| Protein GI | 108804278 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0128] 5-enolpyruvylshikimate-3-phosphate synthase |
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| TIGRFAM ID | [TIGR01356] 3-phosphoshikimate 1-carboxyvinyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0185025 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAGCGGGG TCTCCGGCGT CCCGGGGGTG GACTTCGGGA TAGAGGAGGT GCGGGGGAGC
TTCCCCGAGG AGATGGAGGT GGCCCCGCTC GAGCGCCCGC CGGACGCCAC CGTGCGCCTC
CCCGGCTCCA AGTCCATAAC CAACCGGGCG CTGCTGGTGG CGGCCCTCGC CGGAGGCACC
TCCAGGATCG AGAACCCCCT CCTCGCCGAC GACCCCTTCT GGCTGATGAA CGCCCTGGTG
GGGCTGGGCT TCGGGGTGCG CGTCGGGGAG GAGGGGGCGG TGGAGGTCGC CGGGGGGGGA
GGCGGGATCC CGGCCCCCTC GGCGGACGTG TTCGTGGGCA ACGCGGGGAC GGTGGCCCGC
TTTCTCCCCC CGGCGCTCGC CCTCGGGAGC GGCCCCTACC GGGTGGACGG AACCCCACGC
ATGCGCGAGC GGCCGGTGGC CGAGCTCGTC GAGGCCCTGC GCGCCCTCGG CGCGCGGGTG
GAATGCGAAG AGAGGGAGGG CCACCTCCCC CTCGTGGTGC GCGGCGGGGC GCGCGGCGGC
GGGGAGATCT CCGTTTCCGG CGAGAGGAGC AGCCAGTTCC TCAGCGGGCT GCTCATCAGC
GCCCCCTGCC TCCCCGGCGG CCTGACCGTC CGCCCCAGAG GCGCCCTGGT CTCCCGCCCC
TACGTGGACA TAACGGTGCG GGTGATGCGC TCCTTCGGCG CCTCGGTGGA GGAGGAGCCC
TCCGGCGCGG CCTTCCGGGT CGCCCCCGGC GCCTACCGCG CCACCGCCTA CCGCGTGGAG
CCCGACGCCT CCGCCGCCTC CTACTTTCTG GCCGCCGCCG CCCTCACCGC AGGGAGGGTC
GTCATCCCCG GCCTCGGCCG CTCCTCCCTG CAGGGGGACG TGGCCTTCGC CGGGATCCTG
CGCCGCATGG GCTGCCGGGT CAGCCTCTCC GAAGACCGCA TAGAGCTCGC CGGCCCGCCC
CGCCTGCGCG GCGTCGAGGC CGATATGAAC GCCATCTCCG ACACCATGAT GACCCTCGCC
GCCATCGCCC CCTTCGCCTC CTCCCCCACC CTCATAAAAA ACGTCGCCCA CACCCGCCTG
CAGGAGACCG ACCGCCTCGC CGCCGTCGCC GCCGAGCTCT CCCGCCTCGG CGTCAGGGTC
CACGAAACCC CCGATTCTTT ACGCATAATA CCAGGGAAGG TACGTCCGGC GGCGATCCGC
ACCTACGGCG ACCACAGGAT GGCGATGGCG TTCTCGCTCG TGGGGCTGAG GGTGAGGGGG
GTGAGGATCC TGGACCCCGG CTGCGTGACG AAGACGCTCC CCGGCTACTT CCGGCTTCTG
GAGGGCCTGC GGCGAGGGGG CTAG
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| Protein sequence | MSGVSGVPGV DFGIEEVRGS FPEEMEVAPL ERPPDATVRL PGSKSITNRA LLVAALAGGT
SRIENPLLAD DPFWLMNALV GLGFGVRVGE EGAVEVAGGG GGIPAPSADV FVGNAGTVAR
FLPPALALGS GPYRVDGTPR MRERPVAELV EALRALGARV ECEEREGHLP LVVRGGARGG
GEISVSGERS SQFLSGLLIS APCLPGGLTV RPRGALVSRP YVDITVRVMR SFGASVEEEP
SGAAFRVAPG AYRATAYRVE PDASAASYFL AAAALTAGRV VIPGLGRSSL QGDVAFAGIL
RRMGCRVSLS EDRIELAGPP RLRGVEADMN AISDTMMTLA AIAPFASSPT LIKNVAHTRL
QETDRLAAVA AELSRLGVRV HETPDSLRII PGKVRPAAIR TYGDHRMAMA FSLVGLRVRG
VRILDPGCVT KTLPGYFRLL EGLRRGG
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