| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rxyl_1436 |
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| Symbol | |
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| ID | 4117234 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rubrobacter xylanophilus DSM 9941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008148 |
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| Strand | - |
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| Start bp | 1457865 |
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| End bp | 1460366 |
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| Gene Length | 2502 bp |
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| Protein Length | 833 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 638036228 |
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| Product | nucleotidyl transferase |
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| Protein accession | YP_644210 |
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| Protein GI | 108804273 |
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| COG category | [G] Carbohydrate transport and metabolism
[J] Translation, ribosomal structure and biogenesis
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1109] Phosphomannomutase
[COG1208] Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.510504 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGAAGGCGG TGATAATGGC TGGTGGGCAG GGGACGCGGC TGAGGCCCCT CACCAGCGAG
CAGCCCAAGC CCATGATCCG TATCGCGAAC GTGCCTTGCA TGGAGCACAT AGTGAACCTG
CTCAAGAGGC ACGGGTTCAC GGACATAGCG GTGACGCTGC AGTTCATGCC CGACGAGATC
CGGGACTACT TCGGGGACGG CTCAGATTGG GGGGTGAACA TCCGCTACTC GGTGGAGGAC
TCCCCGGCCG GGACGGCGGG GTCGGTCAAG ATGGCCGAGC GGCAGCTCGG GCTGGAGGGG
GAGCGCCTGC TCATCATCAG CGGGGATGCG CTCACCGACG TGGACCTCGG CGAGCTGCTC
GCCTACCACG AGCAGAAGGG CGGCGAGGCC ACCATGGTCC TCAAGAGCGT GGAGAACCCC
CTGGACTTCG GCATCGTCAT AACCGGGGAG GACGGCAGGA TCTCGCGCTT CCTCGAGAAG
CCCGCCTGGG GCCAGGTCTT CTCCGACACG GTGAACACCG GCATCTACCT GCTCGAGCCC
TCCGTGCTGC GGGAGATCCC GGACCCCGAA GAGGGGGAGT ACGACTTCTC CAAGGATCTC
TTCCCCAGGC TGCTCGAGCA GGGGCGCCCC CTCTACGGCA TGGTCACCGA CGCCTACTGG
GAGGACATCG GGACCCTCGA GCAGTACGCC TCGGCCAACC GCGACGTACT GGAGGGCCGC
GTCAGGGGCG TCAGGCCCCC CGGCACCCGG CTCAGGGAGA ACATCTACGT CGGGCGGCGG
GTGCAGGTCG ACGACGAGGA GCTGGAGGGG CCCGTGGTCA TCGGGGACAA CGTCCGCATA
GACGAGGGCG CCCGGATAAG CCCCTACAGC GTCATCGGGA ACAACGTCGT GGTCGCCTCC
GGGGCGCACA TAGAGCGCTC CATCGTGGCC GACGGCACCT ACGTCGGCGA GGGGGCCGAG
CTGCGGGACA CCCTCGTCGG GCGCTCCTGC TACATCCAGG AGCGCGCCCG CATCCTGGAG
CGCAGCGCGC TCGGCGACGA CGTGATCGTG GGGGAGGGGG CCACCATAGC CCCCGACGTG
AAGGTCTACC CGCACAAGAC CGTCGAGAGC GGGGCGAGCG TCACCCAGTC GCTCATCTAC
GAGACCATGG GCCTGCGCAC GATCTTCCGC GGCGGGCGGG TGAGCGGCAA GTTCAACGTG
GACGTCACGC CGGAGTTCGT CATCCGCCTG GCCTCCTCCT TCGGCACGAC CCTCTCCCCG
GGCTCCATCG TCACCCTGGG CCGCGACTCC TCCGCCGCCG CCCAGGTCGT CAAGCGGGCC
ATGACGGCGG CCCTGCTCGC CACCGGGGTG AACGTCAGGG ACCTCAGGGC GGCGCACGCC
GGCGTCGTGC GCCACGACGT GCTCGCCGGC AAGTCCTCCG CCGGGTGCCA CACCCGGGCC
GGGGAGGACA GCGACGAGGT CGAGGTGCTC TTCTTCTCCT CCGACGCCAC CCCCATGACC
GAGGGGGAGC AGCGGGCCAT CGAGAAGGTC TTCGTGCGCG AGGAGTACCG CAGGGCCCAC
GAGGGGGACA TAGGGCAGCT GATCTTCCCG GGACGGGCGG TGGAGCAGTA CGTGGAGCGC
CTGGAGCGCG CCGTGGACCG CTCCAGGGTC TCCGGCGGCA GCGTGGTCGT GGACTTCTGC
GGCGGGGTGG CCGGGCTGGT GGCCAGCCGG GTCTTCTCGC GCCTCGGGAT AAGCGCCGTG
GTGATGGAGG GCTTCGCCAA CGCCAACGTG GTCGGCGGCG CCCCGCGGAT GGACCTGGAG
GAGGGCCTCG AGCGGGTCGG CAGGATCGTG CCCACCGTGG AGGCGGCCTT CGGGTGCGTG
GTGAACCCCA CGGGAGAGCA GGTCCACTTC GTGGACGACG CCGGCGAGTA CGTCCCCCCG
GACGTTATGC TGGCCTGCCT GATCCGCGGG CTCGAGCCCA GGGAGGTGGT CCTCCCCATA
AACCTGAGCA GCCGCTACGC CGAGCTGGTG GAGAGCTACG GCGGCACGGT CCACTACGCC
CGCACCGGGA TGGGCAACGT CGCCATAAGG GCCGCCGAGC GCGCCGCCGA CCTCGGCGGC
CTCGAGGACG GGCAGTACAT CTTCCCCGCC TTTCTCCCCG CCCCCGACTG CTTTATGACG
CTGGCCCGGG CCCTCGAGCT CTTCAGGGAC CGGCCGCTCT CCAAGGTGCG CAGGGAGTTC
GGCGAGCGCT TCGGCAACGT GGTCCGGGAG AGGCTCGAGT GCCCCTGGTC GGCCAAAGGG
CGCGTCATGC GGGGCCTGGC CGAGCGGTTC GGCGGCGACC CCGACGCCAT CCTCACCGAG
GGGGTGAAGC TCATGGTGGA CGGCGGGTGG GTGCTGATGC TCCCCGACCC GGATAACCCC
CTCTTCTACG TCTACGCCGA GGCCGACGAC GGCAGGCGCC CCGAAGCCCT TATGCAGGAC
TACGTGCGGC TCGTGCGCGA GCTCATCGAG AGCGGCGACT GA
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| Protein sequence | MKAVIMAGGQ GTRLRPLTSE QPKPMIRIAN VPCMEHIVNL LKRHGFTDIA VTLQFMPDEI
RDYFGDGSDW GVNIRYSVED SPAGTAGSVK MAERQLGLEG ERLLIISGDA LTDVDLGELL
AYHEQKGGEA TMVLKSVENP LDFGIVITGE DGRISRFLEK PAWGQVFSDT VNTGIYLLEP
SVLREIPDPE EGEYDFSKDL FPRLLEQGRP LYGMVTDAYW EDIGTLEQYA SANRDVLEGR
VRGVRPPGTR LRENIYVGRR VQVDDEELEG PVVIGDNVRI DEGARISPYS VIGNNVVVAS
GAHIERSIVA DGTYVGEGAE LRDTLVGRSC YIQERARILE RSALGDDVIV GEGATIAPDV
KVYPHKTVES GASVTQSLIY ETMGLRTIFR GGRVSGKFNV DVTPEFVIRL ASSFGTTLSP
GSIVTLGRDS SAAAQVVKRA MTAALLATGV NVRDLRAAHA GVVRHDVLAG KSSAGCHTRA
GEDSDEVEVL FFSSDATPMT EGEQRAIEKV FVREEYRRAH EGDIGQLIFP GRAVEQYVER
LERAVDRSRV SGGSVVVDFC GGVAGLVASR VFSRLGISAV VMEGFANANV VGGAPRMDLE
EGLERVGRIV PTVEAAFGCV VNPTGEQVHF VDDAGEYVPP DVMLACLIRG LEPREVVLPI
NLSSRYAELV ESYGGTVHYA RTGMGNVAIR AAERAADLGG LEDGQYIFPA FLPAPDCFMT
LARALELFRD RPLSKVRREF GERFGNVVRE RLECPWSAKG RVMRGLAERF GGDPDAILTE
GVKLMVDGGW VLMLPDPDNP LFYVYAEADD GRRPEALMQD YVRLVRELIE SGD
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