Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rxyl_1420 |
Symbol | |
ID | 4117276 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rubrobacter xylanophilus DSM 9941 |
Kingdom | Bacteria |
Replicon accession | NC_008148 |
Strand | + |
Start bp | 1441471 |
End bp | 1443114 |
Gene Length | 1644 bp |
Protein Length | 547 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 638036212 |
Product | hypothetical protein |
Protein accession | YP_644194 |
Protein GI | 108804257 |
COG category | [R] General function prediction only |
COG ID | [COG0595] Predicted hydrolase of the metallo-beta-lactamase superfamily |
TIGRFAM ID | [TIGR00649] conserved hypothetical protein |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.128957 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGCACGTCG TGCCCCTCGG GGGGCTCGGC GAGATCGGAA AGAACATGAC CGCCGTCCAC CAGCGGAGCG GGATGCTCGT CGTGGACGCG GGCATGGCGT TCCCCGACGA GGAGATGCCG GGCATAGACC TGGTGCTGCC CGACTTCACC TACCTGCGGG AGCACGCGGA CAGGCTGCGG GGGATCCTCC TCACCCACGG CCACGAGGAC CACGTCGGGG CCATACCCTA CCTGCTGAGG GAGTTCAGGG CCCCCGTCTA CGGGACGCGC CTCACCCTCG GGCTTGTGGA GAGCAAGCTG CAGGAGTTCG GCGTCAAGAA CGCCGACCTG CGGGAGGTGA GCGCCGGGGA GAAGTTCAGC TTCGGGGGCT TCAACGTGGA GTTCATAAAC GTCAACCACT CCATCCCCGG GGCGGTGGCG GTGGCGCTGC GCACGAGCGC GGGGCTCTTC GTGTTCTCCG GCGACTACAA GGTGGACCTC ACCCCCATAG AGGGCGAGCC GATAGACCTG GGCCGGCTGG CGGCCCTGGG CGAGGAGGGG GTGCTGGCGT ACTTCGGGGA CTCGACGAAC TCCGAGCGCC CCGGATACGT GCCCTCCGAG CGCGTGGTGG GCGAGACGCT CAACGAGGTC TTCCGCAGCG TGGAGGGGAG GATCATCGTG GCCTCCTTCG CCTCCCACAT CCACCGCATC CAGCAGGTGG TCGAGGCGGC CAAGCAGCAC GACCGCCTGG TGGCGGTTAC CGGCCGCTCC ATGGTCCGCA ACGTGCAGAT CGCCCGCGAG CTGGGCTACC TGGACCTCCC CGACGCCATG ATGGTGGACC AGCGGGACAT AAGGCGCATC CCCGACCAGG ACCTGGTGGT GCTCACGACC GGCTCGCAGG GCGAGCCGCT CGCCGCCCTC TCCCGGATAG CGAGCGGCAC CCACCGCACG ATAGAGGTGG GCCCGGACGA CGCGGTGGTG GTCGCCGCCC ACCCCATCCC CGGCAACGAA CGCGGGGTCT CCCGCACGAT CAACAACCTG ATGCGCCGCG GGGCCCAGGT GTTCTACAGC CCCCTCAAGC CGGTGCACGT CTCGGGCCAC GCCGCCCAGG AGGAGCAGAA GCTGATGCTC TCCCTCCTCA AGCCGCGCTA CCTGGTGCCG ATGCACGGGG AGTTCCGCCA CCTGATGCAC CACGCCTTCA CCGCGAGGTC CCTGGGCATC CCGGAGGAGC GGATCTTCGT GCTGGAGAAC GGAGCCCGCC TGGAGTTCCG CGGCCGGGAG GCCCGCCGCA TAGAGAACGT CCCCTCCGGG ATGTTCGTGG TGGACGGCGG CGGGCTGGCC GACACCTCCG GCGCGGTGAT GCGCGAGCGC CAGCAGCTCG CCGAAGAGGG CATGTTCATC GTCGTGGCCC GCATCGACTC CCAGAGCGGC GCCCTCGTGG GCGAGCCGGA CGTGATCTCG CGCGGCTTCG TGGACCCGCA GGCCGCAAAC GGCCTGGTCG AGGCCTCCAT CGAGGTGGTC AGCCGCACCC TGCGCCGCAC CGCGAGCCGC AACATAACCG ACTGGGGCCA GCTGAAGAAC GAGATCCGAC GCGACCTCAC CTCCTTCCTG GCCGAACGCA CCAACAAGCG CCCCATGATC CTGCCGCTAA TTGTTGAGGT TTGA
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Protein sequence | MHVVPLGGLG EIGKNMTAVH QRSGMLVVDA GMAFPDEEMP GIDLVLPDFT YLREHADRLR GILLTHGHED HVGAIPYLLR EFRAPVYGTR LTLGLVESKL QEFGVKNADL REVSAGEKFS FGGFNVEFIN VNHSIPGAVA VALRTSAGLF VFSGDYKVDL TPIEGEPIDL GRLAALGEEG VLAYFGDSTN SERPGYVPSE RVVGETLNEV FRSVEGRIIV ASFASHIHRI QQVVEAAKQH DRLVAVTGRS MVRNVQIARE LGYLDLPDAM MVDQRDIRRI PDQDLVVLTT GSQGEPLAAL SRIASGTHRT IEVGPDDAVV VAAHPIPGNE RGVSRTINNL MRRGAQVFYS PLKPVHVSGH AAQEEQKLML SLLKPRYLVP MHGEFRHLMH HAFTARSLGI PEERIFVLEN GARLEFRGRE ARRIENVPSG MFVVDGGGLA DTSGAVMRER QQLAEEGMFI VVARIDSQSG ALVGEPDVIS RGFVDPQAAN GLVEASIEVV SRTLRRTASR NITDWGQLKN EIRRDLTSFL AERTNKRPMI LPLIVEV
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