| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rxyl_1404 |
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| Symbol | |
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| ID | 4116481 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rubrobacter xylanophilus DSM 9941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008148 |
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| Strand | + |
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| Start bp | 1425582 |
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| End bp | 1426715 |
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| Gene Length | 1134 bp |
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| Protein Length | 377 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 638036196 |
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| Product | 1-deoxy-D-xylulose 5-phosphate reductoisomerase |
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| Protein accession | YP_644178 |
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| Protein GI | 108804241 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0743] 1-deoxy-D-xylulose 5-phosphate reductoisomerase |
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| TIGRFAM ID | [TIGR00243] 1-deoxy-D-xylulose 5-phosphate reductoisomerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAGGCGGC GCGTCCTCAT CCTGGGCTCC ACCGGGAGCA TCGGCACCCA GGCGCTCGAG
GTGATCCGGG CCCGCCCCGA GCGCTTCGAG GTGGTGGGGC TCTCGGCCTC CTCGAACGCC
GCCCTCCTGC GGCGGCAGGT CGAGGAGTTC GCCCCCCGCT ACGCCGCCCT GGAGAGCGGG
GAGGCCGGTT CCCTTGCTGG GCTAGGGGCC GAGGTGCTCT CCGGGCCGGG CGCCACCGCC
CTGCTCGCCG CGGTCCCCGC CGACGTGGTG CTCAACGCCG TCGTGGGCTT CGCCGGGCTC
GCCGCCACCG TGAGCGCCCT GCGCGCGGGC AACCGCCTGG CGCTCGCCAA CAAGGAGTCG
GTCGTCGCCG GGGGCGAGTG GGTGATGGAG CTCGCCCGCA AGGGCGCCCT GATCCCGGTC
GACTCCGAGC ACTCGGCCCT CTTCCAGTGC CTGGAGGGCC GCCGCCGGGA GGAGGTGGAC
GGCCTGCTCC TGACCGCCTC GGGGGGGCCG TTCTTCGACC TGGACGCCTC GCGGCTCGCC
GGGGTCGGCC CGGAGGATGC CCTCAGGCAC CCCACCTGGC GGATGGGGGC GAAGATCACG
GTGGACTCCG CCACCATGAT GAACAAGGGC CTCGAGGTCA TAGAGGCCCA CCACCTCTTC
GGCGTCCCCT ACGAGCGCAT ACGGGTGGCC GTCCACCGCC AGTCGGCGGT CCATGGCGGG
GTCCTCTTCA CCGATGGCTC GGCGATCCTC CACGCCGCCC CAACCGACAT GCGCCTGCCG
ATAGCCTACG CCCTCCTTTA CCCCGAGCGT CTCCCCCTCG CCAGACCCCT CCCCTTCGCC
GGAGAGCGCT GGACCTTCGA AGAGCCCCGC AACGACCTCT TCCGCTGCCT GCCCCTCGCC
GTCGCCGCCG GCAGGGCCGG CGGGCCGTAC CCCGCGGCCC TCAACGCCGC GAACGAGGTC
GCCGTCCGGG CCTTCCTTGA CCGGAGGATA AAATTCCTCC AGATACCGGA GATCGTAGAG
GAGGTGCTCG AGGTTGTCCC GGATTTCGGT CCCCTCAGGG ACCTCGAGGC GGTAGAGGCC
GTGGACCGCT GGGCCAGGGA AGAGGCCGGA CGCAGGGTGC GCGCCAGAGC ATGA
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| Protein sequence | MRRRVLILGS TGSIGTQALE VIRARPERFE VVGLSASSNA ALLRRQVEEF APRYAALESG
EAGSLAGLGA EVLSGPGATA LLAAVPADVV LNAVVGFAGL AATVSALRAG NRLALANKES
VVAGGEWVME LARKGALIPV DSEHSALFQC LEGRRREEVD GLLLTASGGP FFDLDASRLA
GVGPEDALRH PTWRMGAKIT VDSATMMNKG LEVIEAHHLF GVPYERIRVA VHRQSAVHGG
VLFTDGSAIL HAAPTDMRLP IAYALLYPER LPLARPLPFA GERWTFEEPR NDLFRCLPLA
VAAGRAGGPY PAALNAANEV AVRAFLDRRI KFLQIPEIVE EVLEVVPDFG PLRDLEAVEA
VDRWAREEAG RRVRARA
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