Gene Rxyl_1402 details

Gene Information

• Locus tag: Rxyl_1402
• ID: 4116479
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Rubrobacter xylanophilus DSM 9941
• Kingdom: Bacteria
• Replicon accession: NC_008148
• Strand: +
• Start bp: 1424141
• End bp: 1424809
• Gene Length: 669 bp
• Protein Length: 222 aa
• Translation table: 11
• GC content: 70%
• IMG OID: 638036194
• Product: undecaprenyl pyrophosphate synthetase
• Protein accession: YP_644176
• Protein GI: 108804239
• COG category: [I] Lipid transport and metabolism
• COG ID: [COG0020] Undecaprenyl pyrophosphate synthase
• TIGRFAM ID: [TIGR00055] undecaprenyl diphosphate synthase

Plasmid Coverage information

• Num covering plasmid clones: 14
• Plasmid unclonability p-value: 0.468753
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGGGGATTA TCATGGACGG CAACGGGCGC TGGGCCCGCC GCCGGGGCCT GCCGCGGGCC 
GCCGGGCACC GGGCGGGGGT CTCGGTGCTC ACGCCGGTAC TGGAGACCGC CGGCGAGCTG 
GGCATCGAGT CGCTCACCCT CTACGCCTTC TCCACGGAGA ACTGGTCCCG CCCGGCGGAG 
GAGGTGGACA CCCTGATGTC GCTGTTTCTG GAGACTGCGC GGCGGAAGCT TCCGGAGATC 
AAGGAGCGCG GGGCGCGGGT GCGCTTTGTG GGGCGCAGGG AGCACCTCCC TAAGCCGGTG 
CTGCGGGCGA TGCGCGAGGC CGAGGAGCTT ACGGCCGAGA ACGACCGGCT GCGGGTCTAC 
ATCGCCCTGA ACTACGGGGG GCGCTCGGAG ATAGTGGACG CCGCGCGCAG GATGCTCGCG 
GAGGGGCTCT CCCCGGAGGA GGTGGACGAG CGGACCTTCG CCCGCTACCT CTACGCGCCG 
GAGGTGCCGG ACCTGGACCT CCTGATCCGC ACGAGCGGGG AGATGCGGGT CTCGAACTTT 
CTGCTGTGGC AGATCGCCTA CGCCGAGCTC TACGTGACGG AGACTTTCTG GCCGGACTTC 
TCCCGGGAGG AGTTCCTGAA GGCCATCGAG GACTTCGCCT CCCGCTCCCG CCGCTGGGGC 
GGGGTGTAG 

 

Protein sequence

MGIIMDGNGR WARRRGLPRA AGHRAGVSVL TPVLETAGEL GIESLTLYAF STENWSRPAE 
EVDTLMSLFL ETARRKLPEI KERGARVRFV GRREHLPKPV LRAMREAEEL TAENDRLRVY 
IALNYGGRSE IVDAARRMLA EGLSPEEVDE RTFARYLYAP EVPDLDLLIR TSGEMRVSNF 
LLWQIAYAEL YVTETFWPDF SREEFLKAIE DFASRSRRWG GV