Gene Rxyl_1401 details

Gene Information

• Locus tag: Rxyl_1401
• ID: 4116478
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Rubrobacter xylanophilus DSM 9941
• Kingdom: Bacteria
• Replicon accession: NC_008148
• Strand: +
• Start bp: 1423494
• End bp: 1424054
• Gene Length: 561 bp
• Protein Length: 186 aa
• Translation table: 11
• GC content: 67%
• IMG OID: 638036193
• Product: ribosome recycling factor
• Protein accession: YP_644175
• Protein GI: 108804238
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0233] Ribosome recycling factor
• TIGRFAM ID: [TIGR00496] ribosome recycling factor

Plasmid Coverage information

• Num covering plasmid clones: 11
• Plasmid unclonability p-value: 0.100309
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCGGACG TCATAGACCT TTCGGATGCC GAACGCCGGA TGAAGGGGGC GCTCGAGGCG 
GTCAGGCACC AGTTCGCGAC CATCCGCACG GGCAGGGCCA ACCCGGCGCT GCTGGACAGG 
ATCGAGGTGG AGGCCTACGG CACCCGGATG CCGATAAAGA GCGTGGCCAG CATCGGGGCG 
CCGGAGCCGC GCCTCCTCAC CATCACCCCC TACGACCCCA ACCTGCTGAA GACCATAGAG 
CGGGCCATAA GGGACTCGGA CCTCGGGCTC AACCCGCAGA ACGACGGCAA GATAATCCGG 
CTGCCCATCC CGGAGCTCAC CGAGGAGCGG CGGCGGGAGC TGATCCGGCT GGTCCGCCAC 
ATGGCGGAGG AGGGGCGGGT CTCGGTGCGC AACGTCCGCC GGGACGAGAT GCACGACATC 
CAGCGGCTGC GCAGGGAGGG GGAGATCTCG GAGGACGACG AGCGCCGGGC CGAGGCCGAG 
CTGCAGAAGC TAACCGACGC CTACATAAAG CGGATCGACG AGGCGCTGGC CGAGAAAGAA 
GCCGAGCTGA TGGAGGTCTA G 

 

Protein sequence

MSDVIDLSDA ERRMKGALEA VRHQFATIRT GRANPALLDR IEVEAYGTRM PIKSVASIGA 
PEPRLLTITP YDPNLLKTIE RAIRDSDLGL NPQNDGKIIR LPIPELTEER RRELIRLVRH 
MAEEGRVSVR NVRRDEMHDI QRLRREGEIS EDDERRAEAE LQKLTDAYIK RIDEALAEKE 
AELMEV