Gene Rxyl_1399 details

Gene Information

• Locus tag: Rxyl_1399
• ID: 4116476
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Rubrobacter xylanophilus DSM 9941
• Kingdom: Bacteria
• Replicon accession: NC_008148
• Strand: +
• Start bp: 1422060
• End bp: 1422683
• Gene Length: 624 bp
• Protein Length: 207 aa
• Translation table: 11
• GC content: 67%
• IMG OID: 638036191
• Product: translation elongation factor Ts (EF-Ts)
• Protein accession: YP_644173
• Protein GI: 108804236
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0264] Translation elongation factor Ts
• TIGRFAM ID: [TIGR00116] translation elongation factor Ts

Plasmid Coverage information

• Num covering plasmid clones: 6
• Plasmid unclonability p-value: 0.00253635
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGAGGGAGA CGAGAGCGAG GAGAGGTAAC AGAGCGTTGG CTACGCAGAT AGAGAAGATA 
AAGCAGCTTC GCGAGGAGAC CGCGGCGGGG ATGATGGATG TCAAGCGGGC TCTGGAGGAG 
TCCGGCGGGG ACCTGGACGG GGCCCGCAGG ATCCTCAAGG AGCGCGGGCA GGCCATCGCC 
GCCAAAAAGA GCCGGCGCGA GACCCACGAG GGCCGGATAG AGGCCTACGT GCACTTCAAC 
GGCCGGGTGG GGGTCCTGGT GGAGGTCAAC TGCGAGACGG ACTTCGTCGC CCGGACGCCG 
GAGTTCCGGG AGTTCTGCCG GGACATCGCG CTGCACATCG CCTCCATGAA GCCCCTGTGC 
GTCGCGCCGG AGGACGTCCC CGAGGAGGCG CTCGCGGAGG AGCGCGAGAT AGCCGAGAAG 
CAGGCCGCCG AGATGGGCAA GCCGGAGCAC ATAACCCGCC AGATCGTGGA GGGCCGGCTG 
AAGAAGTGGG TCTCCGAGCA GGCCCTGCTC ACCCAGCCCT TCGCCAAGGA CCCGGGCAAG 
ACCGTCGGGG AGCTGCTGCA GGAGACGGTC AGCAAGGTCG GCGAGAACGT CGTGATCCGC 
CGCTTCGTTC GCTACGAGCT CTAG 

 

Protein sequence

MRETRARRGN RALATQIEKI KQLREETAAG MMDVKRALEE SGGDLDGARR ILKERGQAIA 
AKKSRRETHE GRIEAYVHFN GRVGVLVEVN CETDFVARTP EFREFCRDIA LHIASMKPLC 
VAPEDVPEEA LAEEREIAEK QAAEMGKPEH ITRQIVEGRL KKWVSEQALL TQPFAKDPGK 
TVGELLQETV SKVGENVVIR RFVRYEL