| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rxyl_1397 |
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| Symbol | |
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| ID | 4116474 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rubrobacter xylanophilus DSM 9941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008148 |
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| Strand | + |
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| Start bp | 1420214 |
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| End bp | 1421008 |
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| Gene Length | 795 bp |
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| Protein Length | 264 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 638036189 |
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| Product | RNA polymerase, sigma 28 subunit |
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| Protein accession | YP_644171 |
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| Protein GI | 108804234 |
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| COG category | [K] Transcription |
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| COG ID | [COG1191] DNA-directed RNA polymerase specialized sigma subunit |
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| TIGRFAM ID | [TIGR02479] RNA polymerase sigma factor, FliA/WhiG family
[TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.00369559 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAGCGGGC CCACGCTCGG CCGGCTCTGG GAGCTCTACG GCCGGGCGCG GGCGGAGGCG
GCCGGGCTGC GGGCCGCCGG GCGCGGGGGG CCGGGGCTGC GGCGGGCCGA GCGCCGGGTG
GGCCAGCTGC GCGACCGGCT CGTGGTCAAC TACTCCCCGC TCGTAAAGTA CGTGGCCGGC
AGGATGGCGG CCCGCATCCC CGGCGGGGTG GAGCAGGAGG ATCTCGTCTC GTGGGGGGTG
GTGGGGCTCC TCAAGGCCGT GGAGACCTTC GACCCCGCGC GGGGGGCCAA GTTCGAGACC
TACGCCATCT CCAAGATCCG GTGGGCCATC CTGGACGAGC TCAGAAAGGC CGACCCGCTC
CCCCGGCGCG TGCGGCGCCG GGTCCGGGAG ACCCAGCGCG CCGCCAGCGC CCTCACCCAG
ACGCTGCGGC GGGCGCCCAC CGAGGCCGAG ATAGCGCGCG AGGTGGGGGT GGGGCTCGCC
GAGCACCGGG AGACGCTCGA GCGCTACCAC CGCGCCCGCA CGTGGTCGCT CGAGGAGCTC
CTCTCCGGCA TGGGGGAGGG CGGGCGCGAG CTCTCCGTCT CGGATCCCAC AGCCGAGACC
GCCGAGCTGC GCGAGCGGCT CGCGGAGGCC CTCGAGTCCC TCAGCGAGCG GGAGCGGGTC
GTAATAACCT TCTACTACTA CCAGGGGCTC ACGCTGCGCG AGATCGGTCG CGCCCTCAAC
CTCACGGAGG GGAGGATCTC CCAGATCCTG CGCCGGGCCC TGCAGCGGCT GCGCGACCGG
CTCTCAGGGG TCTAG
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| Protein sequence | MSGPTLGRLW ELYGRARAEA AGLRAAGRGG PGLRRAERRV GQLRDRLVVN YSPLVKYVAG
RMAARIPGGV EQEDLVSWGV VGLLKAVETF DPARGAKFET YAISKIRWAI LDELRKADPL
PRRVRRRVRE TQRAASALTQ TLRRAPTEAE IAREVGVGLA EHRETLERYH RARTWSLEEL
LSGMGEGGRE LSVSDPTAET AELRERLAEA LESLSERERV VITFYYYQGL TLREIGRALN
LTEGRISQIL RRALQRLRDR LSGV
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