| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rxyl_1387 |
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| Symbol | |
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| ID | 4116465 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rubrobacter xylanophilus DSM 9941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008148 |
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| Strand | + |
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| Start bp | 1413022 |
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| End bp | 1414353 |
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| Gene Length | 1332 bp |
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| Protein Length | 443 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 638036180 |
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| Product | signal recognition particle subunit FFH/SRP54 (srp54) |
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| Protein accession | YP_644162 |
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| Protein GI | 108804225 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0541] Signal recognition particle GTPase |
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| TIGRFAM ID | [TIGR00959] signal recognition particle protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.133728 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTCGATA CCTTAAGCGA GAGGCTCAAC ACGGCGCTGG AGGGGGTCCG CGGGAGCGGT
ACCCTCACCG AGGAGCAGGT CAAGAAGGTG ACCCGGGAGA TAAGGCTCGC CCTGCTCGAG
GCCGACGTCA ACTACAACGT GGTCAAGGAG TTCGTCGGCC GGGTGCGGGA GCGGGCCACC
GGGGCGGAGG TCTCGAGGGC CCTCTCGCCG GGCCAGCAGG TGGTCAAGAT CGTCAACGAG
GAGCTGGCCA ACCTCATGGG CGGGAGCGCC CACAAGCTCT CCTACGCCTC GCGGCCGCCG
ACCGTGGTGA TGCTCGCCGG GCTCAACGGC CACGGCAAGA CCACCGCGGC GGGCAAGCTC
GCGCTCTTCG TGCGCAAGCA GGGCAAGAAC CCCTTTCTGG TGGCCTGCGA CACCTACCGG
CCCGCGGCGG TGGACCAGCT CCGGCAGATC GGGCGCGAGC TCGGGGTGCC CGTCTACGAC
GAGGGGACCG AGGCGCCGCC GGAGGAGATC GCCGAGCGCG GCGTCAGGGC CGCCCGCGAC
GGCGGCTACG ACTTCGTCAT CGTGGACACC GCGGGGCGGC AGGTCGTCGA CACCGAGATG
ATGGAGGAGC TGGGGCGCGT TCGCCGCGCC TGCCGGCCGC ACTCCGTGCT CCTCGTGCTC
GACGTGGTGA CCGGCCAGAC CGCCGTGGAG GTCGCGCAGG CCTTCCAGGA GTACGCCGAC
TTCGACGGCA TGATCCTCAC CAAGCTCGAC GGCGACGCGC GCGGGGGGGC GGCGCTGTCG
GTGGTCTCGG TCACCGGGCG GCCCATAAAG TTCGCCTCCG AGGGCGAGAA GATGAGCGAG
TTCGACTACT TCTACCCCGA CCGGATGGCG GGCCGCATCC TCGGGATGGG GGACGTGCTC
ACGCTCATCG AGAAGGCCGA GGCGCAGATG GACCGCCGGG AGGCCGAGGC GCAGAGCAAG
AAGCTCATGG CGGGCAAGCT CACCTTCGAG GACTTTCTGC AGCAGATGCA GATGATCAAG
CGCATGGGCC CGCTCTCCGG GATACTCGGC ATGCTCCCGG GCATCGGCCA GCAACTCAAG
GACGTCCAGA TCGACGACCG GATGTTGAAC CGGGTCGAGG CCATGATAAC CTCCATGACG
CCGCAGGAGC GGCGCAACCC CAAGCTGCTG CAGAACCCGA GCCGGGTGCG CAGGATCGCC
CGCGGCAGCG GCACCTCGCC GCAGGACGTG CAGCGGCTGG TCAAGCAGTT CGGCGAGATG
CAGAAGATGA TGCGGCAGAT GGGCAAGGGC GGGATGCCGA GGATGCCCAA GATGCCGTTC
GGCATGCGGT AA
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| Protein sequence | MFDTLSERLN TALEGVRGSG TLTEEQVKKV TREIRLALLE ADVNYNVVKE FVGRVRERAT
GAEVSRALSP GQQVVKIVNE ELANLMGGSA HKLSYASRPP TVVMLAGLNG HGKTTAAGKL
ALFVRKQGKN PFLVACDTYR PAAVDQLRQI GRELGVPVYD EGTEAPPEEI AERGVRAARD
GGYDFVIVDT AGRQVVDTEM MEELGRVRRA CRPHSVLLVL DVVTGQTAVE VAQAFQEYAD
FDGMILTKLD GDARGGAALS VVSVTGRPIK FASEGEKMSE FDYFYPDRMA GRILGMGDVL
TLIEKAEAQM DRREAEAQSK KLMAGKLTFE DFLQQMQMIK RMGPLSGILG MLPGIGQQLK
DVQIDDRMLN RVEAMITSMT PQERRNPKLL QNPSRVRRIA RGSGTSPQDV QRLVKQFGEM
QKMMRQMGKG GMPRMPKMPF GMR
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