| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rxyl_1383 |
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| Symbol | |
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| ID | 4116049 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rubrobacter xylanophilus DSM 9941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008148 |
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| Strand | + |
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| Start bp | 1406647 |
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| End bp | 1407894 |
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| Gene Length | 1248 bp |
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| Protein Length | 415 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 638036176 |
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| Product | 3-oxoacyl-[acyl-carrier-protein] synthase II |
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| Protein accession | YP_644158 |
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| Protein GI | 108804221 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0304] 3-oxoacyl-(acyl-carrier-protein) synthase |
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| TIGRFAM ID | [TIGR03150] beta-ketoacyl-acyl-carrier-protein synthase II |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.00599775 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAGCTCCA CCGGCAACGG CCACGCGCTC ATAACGGGCC TCGGGGCGGT GACCCCGCTG
GGCAGCGGGG TGGAGAACTT CTGGGACGCC GCCCTGCACG GCAAGAGCGG GATAGGGGAG
ATAACCCTCT TCGACCCCTC GCCCTACCCC TCCCGGATCG CCGGTGAGTG CCGGGACTTC
GACCCGACCG ACTACATGAG CCGCAAGGAG GCCCGCCGGA TGGACCGCTA CGGTCAGTTC
GGCGTGGCCG CCGGCATCGA GGCGGCGCAG CACGCCGGCA TCGTGGACAT CGTCCGCAGG
AGGCCCGAGC GGGTGGCGAT AGTCATCGGC AGCGGGATCG GCGGGATCTC CACCTGGGAG
CGCGAGTACC GGGTGCTGCA CGAGCGGGGG CCGGGGAGGG TGAGCCCCTT CCTGATCACC
ATGATGGTCC CGAACATGGC CGCCGGGCAG CTGGCGATCA TGCTGGGGGC CACCGGCCCC
ACCCAGTGCC CGGTGCTGGC CTGCGCCACC GGCGGCGAGG CGATAGCCGA GGGGCTCGAG
CTGATCCGGC GGGGCGACGC CGACGTGGTG ATCGCCGGCT CCTCGGAGGC CCCGATCACG
CCGCTCTCCA TGGCGGGCTT CTGCGCGATC CGGGCGGTGA GCCGCCGGAA CGAGGAGCCG
CACCGGGCCA GCCGCCCCTT CGACGCCGGT CGCGACGGCT TCGTGATGAG CGAGGGGGCT
GGGGCGATGG TGCTGGAGAG CCCGGAGCAC GCCGAGCGCC GGGGCGCTGA GCCGATAGCC
GCCGTGGCCG GCTACGGCCG GACCACCGAC GCCTACCACG TGACCGCCCC CGACGAGCAG
GGGCGCGGGG TGGAGCGGGC CATCCGGCTC GCCCTGGAGG ACGCGGGGAT GTCGCCCGAG
GACGTCGGGC ACGTCAACGC CCACGCCACC GCCACCCCCA CGGGCGACGG CCCCGAGACC
CGGGCCATAG CGCGGGTCGT GCCGCACGCC CACGTCTCCG GGACGAAGTC CATGACCGGC
CACTCCTTCG GGGCCGTGGG CACGACGGAG GGGATAATGT GCGCCCTGGC GCTCAAGCAC
AAGGTCGTCC CCCCGACCAT AAACCTGGAG AGGGTGGCCG ACGACTGCGA GCGGCTGAAC
TACGTGGGGC CCGAGGCCCG GCGCGTCCCG GACCTGAAGG GCGCCATCTC CAACTCCATG
GGGTTCGGCG GGCACAACGT GGTTGTGGCG TTCAGGAGCG TGGAATAG
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| Protein sequence | MSSTGNGHAL ITGLGAVTPL GSGVENFWDA ALHGKSGIGE ITLFDPSPYP SRIAGECRDF
DPTDYMSRKE ARRMDRYGQF GVAAGIEAAQ HAGIVDIVRR RPERVAIVIG SGIGGISTWE
REYRVLHERG PGRVSPFLIT MMVPNMAAGQ LAIMLGATGP TQCPVLACAT GGEAIAEGLE
LIRRGDADVV IAGSSEAPIT PLSMAGFCAI RAVSRRNEEP HRASRPFDAG RDGFVMSEGA
GAMVLESPEH AERRGAEPIA AVAGYGRTTD AYHVTAPDEQ GRGVERAIRL ALEDAGMSPE
DVGHVNAHAT ATPTGDGPET RAIARVVPHA HVSGTKSMTG HSFGAVGTTE GIMCALALKH
KVVPPTINLE RVADDCERLN YVGPEARRVP DLKGAISNSM GFGGHNVVVA FRSVE
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