Gene Rxyl_1380 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRxyl_1380 
Symbol 
ID4116046 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRubrobacter xylanophilus DSM 9941 
KingdomBacteria 
Replicon accessionNC_008148 
Strand+ 
Start bp1405133 
End bp1405585 
Gene Length453 bp 
Protein Length150 aa 
Translation table11 
GC content71% 
IMG OID638036173 
Product3-hydroxyacyl-[acyl-carrier-protein] dehydratase 
Protein accessionYP_644155 
Protein GI108804218 
COG category[I] Lipid transport and metabolism 
COG ID[COG0764] 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases 
TIGRFAM ID[TIGR01750] beta-hydroxyacyl-[acyl carrier protein] dehydratase FabZ 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0733494 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGGGCGC CGCTCGGGCC GGCCGAGATC CGGCGTCTCC TCCCGCACCG CTACCCCTTT 
CTGCTGGTCG ACAGGATCGA AGAGCTCGAG CCCGGCGTCA GGGCGGTGGG CGTAAAGAAC 
GTCACCCAGA ACGAGCCCTT CTTCCAGGGA CACTTCCCGG GCTACCCGGT GATGCCGGGC 
GTACTCATCG TGGAGGCCAT GGCCCAGGTG GGGGCCGTGG GGGTCATGGC CGTGGAGGAG 
TACCGCGGCA GGCTCGCGCT CTTCGCCGGC ATAGACGGCG TCCGCTTCAG GAGGCAGGTC 
GTGCCCGGCG ACGCGCTCCG GATGGAGGTC GAGATAGACC GGCTCAGGGG CCGCGTCGGG 
CGCGGCCGGG GGCTGGCCTT CGTGGGCGGG GAGCGGGCCT GCGAGGCGGA GCTCATGTTC 
GCGTTCGCCG AGAGGGGGGA GGAGAGCCGA TGA
 
Protein sequence
MRAPLGPAEI RRLLPHRYPF LLVDRIEELE PGVRAVGVKN VTQNEPFFQG HFPGYPVMPG 
VLIVEAMAQV GAVGVMAVEE YRGRLALFAG IDGVRFRRQV VPGDALRMEV EIDRLRGRVG 
RGRGLAFVGG ERACEAELMF AFAERGEESR