| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rxyl_1364 |
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| Symbol | |
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| ID | 4117183 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rubrobacter xylanophilus DSM 9941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008148 |
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| Strand | + |
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| Start bp | 1391764 |
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| End bp | 1392873 |
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| Gene Length | 1110 bp |
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| Protein Length | 369 aa |
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| Translation table | 11 |
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| GC content | 77% |
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| IMG OID | 638036157 |
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| Product | diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase |
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| Protein accession | YP_644139 |
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| Protein GI | 108804202 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0117] Pyrimidine deaminase
[COG1985] Pyrimidine reductase, riboflavin biosynthesis |
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| TIGRFAM ID | [TIGR00227] riboflavin-specific deaminase C-terminal domain
[TIGR00326] riboflavin biosynthesis protein RibD |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATCTCG CCCGCGAACT CGCCGAACGC GGGCGTTACA CGGCGGCTCC CAACCCGCTC
GTCGGGGCGG TTGTCGTGCG CGGCGGCGCG GTGGTCGGCG AGGGCTGGCA CGTGCGCCCC
GGCGAGGAGC ACGCCGAGGC GATGGCCCTG CGGCGGGCCG GCGCCGCGGC GCGCGGGGCG
ACGATGTACG TAACCCTCGA GCCCTGCAAC CACCACCTCA GGACGCCCGG CCCCCCATGC
GCCGAGGCGG TGCTCCGGGC CGGCATCCGC CGGCTGGTCG TCGGTCACGC GGACCCCAAT
CCCCGGGTGA ACGGCCGCAG CCTGCGCCGG CTGCGGGAGG CCGGGGTGGA GGTGGAGGTG
CTCGACGACC CGGTCTTCGA GCGGCAGAAC GAGCGGTTCT TCTGGGCGAT GCGCAGGGGG
CGGCCCTTCG TGCACCTCAA GCTCGCGGTC ACGCTGGACG GCAGGATCGC CGCCGCCGGC
GGCGACTCGC GGTGGGTCAC CGGGCCCGAG GCGCGCCGGC GGGCGCACGC GCTGCGGGCC
GAGGCCGGGG CGGTGCTGGT GGGGGCCGGG ACCGCGCGCG CCGACGACCC GCTGCTCACG
CCGCGCGGGC TGGACGAGGA GCCCCCGCGG GTACTGCGGG CCGTGCTGGA CCCGCGCCTC
ACCCTCCCGG AGGCCTCTAG GCTGGTCAGC ACCGCTCCCG AGTGGCCGCT GGTGGTGTTC
TGCGCGGAGG GGGCCTCCCC GCGGAGGAGG CGGCGGCTCG AGGCCGCCGG GGCCGAGGTG
GAGGCTGTGC CGGCGGCCGG GGACGGCGGG CTGGACCTCG GGGCCGTTCT GGAGCGGCTG
CGGCTCCGGG GGGCCAGCGG GGTGCTCGTG GAGGGGGGCG GGCAGACGGC CCGGCGGTTC
GTCGCGGGCG GGCTCGTCAA CAAGATGACG CTCTTCTACG CCCCCAGGCT CGCCGGGGCC
GACGGAGTCC CCATGGTCGG CGGGCTGCGG GTGACCCGGA TGGCGCAGGC GCCGCGCTTC
TCCGTCGCGG GGGTGGAGAG GCTCGGAGAC GACCTCGCGG TGACGCTGTA TCCGGCCGAG
GGAGGTGGGG ATGTTCACCG GGTTGGTTGA
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| Protein sequence | MDLARELAER GRYTAAPNPL VGAVVVRGGA VVGEGWHVRP GEEHAEAMAL RRAGAAARGA
TMYVTLEPCN HHLRTPGPPC AEAVLRAGIR RLVVGHADPN PRVNGRSLRR LREAGVEVEV
LDDPVFERQN ERFFWAMRRG RPFVHLKLAV TLDGRIAAAG GDSRWVTGPE ARRRAHALRA
EAGAVLVGAG TARADDPLLT PRGLDEEPPR VLRAVLDPRL TLPEASRLVS TAPEWPLVVF
CAEGASPRRR RRLEAAGAEV EAVPAAGDGG LDLGAVLERL RLRGASGVLV EGGGQTARRF
VAGGLVNKMT LFYAPRLAGA DGVPMVGGLR VTRMAQAPRF SVAGVERLGD DLAVTLYPAE
GGGDVHRVG
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