| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rxyl_1359 |
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| Symbol | |
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| ID | 4117178 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rubrobacter xylanophilus DSM 9941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008148 |
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| Strand | + |
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| Start bp | 1385783 |
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| End bp | 1388431 |
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| Gene Length | 2649 bp |
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| Protein Length | 882 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 638036152 |
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| Product | alanyl-tRNA synthetase |
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| Protein accession | YP_644134 |
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| Protein GI | 108804197 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0013] Alanyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00344] alanine--tRNA ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.00180995 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAGCACA TGAAGAGCGC CGAGATACGC CGCAGGTTCC TGGACTTCTT CGCCGAGCGG
GACCACAGGA TCTACCCGAG CTCCTCCCTG ATCCCGCACG ACGACCCCAC CGTGCTCCTG
ACCACGGCCG GGGTCCAGCA GTTCATCCCG TACTTTCTCG GGCAGGAGAA GCCGCCGCAT
CCCCGGGCCG CCAGCGTCCA GAAGTGCTTC CGGACCCAGG ATCTGGAGGA GGTGGGCGAC
CCCAGCCACC TCACCTTCTT CGAGATGCTC GGGAACTTCT CCTTCGGGGA CTACTTCAAG
AAGGAGGCCA TCGGGTGGGC CTGGGAGTTC CTCACCGAGG GGCTCGGCAT CCCCCCCGAG
CGGCTCTGGG TGACCATCTT CGAGGGCGAC GAGAACGCCC CGGAGGACCT GGAGGCCAAG
AGGTTCTGGA TGGAGGTGGG GGTGCCGGAG CACAAGATCT TCGGGCTCCC CAAGTCCGAG
AACTGGTGGG GCCCTGCGGG CGAGACCGGC CCCTGCGGCC CCTGCTCGGA GATCTACTAC
GACTACGGCG AGGAGTTCGG GCCGGGCGAT CCCCTGGAGG ACGCCCGCTA CGGCCCCGGA
GGCGAGGAGG GCGACGCCCG CTTCCTCGAG GTGTGGAACC TGGTCTTCAA CCAGTACGAG
CAGCTGCGGG ACGGGAGCCT GCGGCCGCTG GAGCAGACCG GCATAGACAC CGGGATGGGG
CTCGAGCGCA TCGCGGCGGT CATGCAGGGG GCGCGCTCGG TGTACGAGAC CGACCTCTAC
GCCCCGGTCA TCGAGCGGGC GCGGGAGTAC ACCGGGGTCG CGCTCGGGGA CGGGGAGGAA
ACCGACCGGG CGCTGCGCAT CCTCGCCGAC CACGCCCGGG GGATGGCCTT CCTCATCGCC
GACGGGGTGC GGCCGGGCAA CCAGCGGCGG GAGTACGTGC TGCGGCGGAT CATCCGCCGG
GCCACCCGCG AGGCCTACGG GCGCTTCGGG CTCGACGCCG GAAGGATAGC CTCCCTCGCC
GAGACCGTCG CCGACTACAT GGGCGGCTTC TGGGGCGAGC TGCGCGAGGC GCGGGACGAG
ATCCGGCGGG TGGTCGAGAG CGAGGCCGCC CGGTTCATCG ACATCTACCA CTCCGGGATG
CGCCTGCTGG AGGCGGAGAT CTCCCGCCTG GAGGGCGGGC GGTTCCCGGG GGAGGTGGCC
TTCACGCTGC ACGACACCTA CGGTTTCCCG GTGGAGGTGA CCCGGGAGGT GCTCGCGGAG
CGCGGGATCT CGCTGGACGA GGCCGGCTTC CGGCGGGCGA TGGAGCGGCA GCGCGAGCGG
GCGCGGGAGG CGCTCGAGGG GCACGAGCGG GCGGTGGCCG CCTTCCGCGA CAGGGAGATC
CGGAGCCGCT TCGTCGGCTA CGAGCGGGAG CAGGCGGAGA CCAGGATACT CGCCATCGAG
CCCGTCCCCG ACGCCGAGGG GGAGCTCTAC CTGGTCCTCG AGGAGAACCC GTTCTACGCC
ACCGGCGGGG GGCAGGTGGC GGACACCGGC TGGATCTCCT CCGAGAAGGG GCAGCTGGAG
GTGGTCGACG CCATCCCCGC CGGGGACTAC CAGGTCCTGC GGGCGAGGGT GGAGCGCGGC
CGCTTCGAGG CCGGGGACGA GGTGGTCGCC TCCATAAACC GCGTGCGGCG CCAGCAGATA
GAGGCCAACC ACACCGCGAC CCACATCCTG CACTGGGCGC TGCGGGCCGT GCTCGGCAAG
GAGGTGGTGC AGGCCGGGAG CTACGTCGGG CCCGACCGGC TGCGTTTCGA CTACCGCTAC
TCGGGGCGGG TGACCGAGGA GGAGCTGGCC CGCGTCCAGG AGCTGTGCCT GCTCAAGATC
ACCGAGAACC AGCCCGTCCG CTACTACACC ACCACGCTGG AGGAGGCCCG CAAGCTCGGG
GCCATCATGC TCTTCGGGGA GAAGTACGGG GAGCTGGTGC GGGTGGTGGA GGTGGACGGC
TTCTCCCGCG AGCTGTGCGG CGGGACCCAC GTGCGCGGGA CGGCCGAGAT AGGGGCCTTC
AAGATCACCT CCAACCGGCG GCACGGCGCG GACCTCTACA GGATCGAGGT GATAACCGGC
CGGGAGGCGC TCTACTATCT CACCCGGGCC GCCGAGACCG CCGAGCGGCT CGCCGCGGAG
CTGCGGCTCC CCGGGGTCGA GGAGCTTCCG GAGGCGGTTT CCCGCCTGCG GGAGGAGCTG
CAGCAGGCGC GCGAGGAGCT GCGCCAGCAG GCGCTCAAGA GGGGGCTCGA GGAGGTCGGC
TCGCTGGTCG AGAACGCCGA GTCCATAGAC GGGACGAAGG TGGTGACCGG CCGGGTTGCC
GCCGCGGACG TGAGGGATCT GCGCCAGATC TCGGACGACG TCCGCAACCG GGTGGGCGGG
CCCGTGGCGG TGGTGCTGGC GGCCGACCTG GACGGCAAGG CGGTGCTGGT GGCGAACTTC
CACCCGGAGG TCTCCAAGCG CGTGAAGGCG GGCGACGTGG TCCGGGAGGC GGCCGGCATC
CTCGGCGGCG GGGGCGGGGG CAGCCCCACG ATGGCGCAGG CCGGCGGCGG GAACCTGGAG
GCCATCCCCG CGGCCCTGGA GCGGGTGCGG CAGATCCTGA GCCGCGAGCT CTCCGGCCGC
GAGGCGTGA
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| Protein sequence | MEHMKSAEIR RRFLDFFAER DHRIYPSSSL IPHDDPTVLL TTAGVQQFIP YFLGQEKPPH
PRAASVQKCF RTQDLEEVGD PSHLTFFEML GNFSFGDYFK KEAIGWAWEF LTEGLGIPPE
RLWVTIFEGD ENAPEDLEAK RFWMEVGVPE HKIFGLPKSE NWWGPAGETG PCGPCSEIYY
DYGEEFGPGD PLEDARYGPG GEEGDARFLE VWNLVFNQYE QLRDGSLRPL EQTGIDTGMG
LERIAAVMQG ARSVYETDLY APVIERAREY TGVALGDGEE TDRALRILAD HARGMAFLIA
DGVRPGNQRR EYVLRRIIRR ATREAYGRFG LDAGRIASLA ETVADYMGGF WGELREARDE
IRRVVESEAA RFIDIYHSGM RLLEAEISRL EGGRFPGEVA FTLHDTYGFP VEVTREVLAE
RGISLDEAGF RRAMERQRER AREALEGHER AVAAFRDREI RSRFVGYERE QAETRILAIE
PVPDAEGELY LVLEENPFYA TGGGQVADTG WISSEKGQLE VVDAIPAGDY QVLRARVERG
RFEAGDEVVA SINRVRRQQI EANHTATHIL HWALRAVLGK EVVQAGSYVG PDRLRFDYRY
SGRVTEEELA RVQELCLLKI TENQPVRYYT TTLEEARKLG AIMLFGEKYG ELVRVVEVDG
FSRELCGGTH VRGTAEIGAF KITSNRRHGA DLYRIEVITG REALYYLTRA AETAERLAAE
LRLPGVEELP EAVSRLREEL QQAREELRQQ ALKRGLEEVG SLVENAESID GTKVVTGRVA
AADVRDLRQI SDDVRNRVGG PVAVVLAADL DGKAVLVANF HPEVSKRVKA GDVVREAAGI
LGGGGGGSPT MAQAGGGNLE AIPAALERVR QILSRELSGR EA
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