Gene Rxyl_1350 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRxyl_1350 
Symbol 
ID4117169 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRubrobacter xylanophilus DSM 9941 
KingdomBacteria 
Replicon accessionNC_008148 
Strand
Start bp1377336 
End bp1378427 
Gene Length1092 bp 
Protein Length363 aa 
Translation table11 
GC content76% 
IMG OID638036143 
Productcarboxylate-amine ligase 
Protein accessionYP_644125 
Protein GI108804188 
COG category[S] Function unknown 
COG ID[COG2170] Uncharacterized conserved protein 
TIGRFAM ID[TIGR02050] uncharacterized enzyme 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.272593 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGAGACCC GCTTCGGAGC CTCGCCCCCC TACACGGTGG GAGTCGAGGA GGAGTTCCAG 
CTGATCGACC CGCGCACGCG GGCCCTGACC CCGAAGATAG AGGAGGTGCT GGCCGCCGGC
GACGGGGAGC TCCCGGAGGG CACGCTGGCC TCGGAGCTCT CGGCCTCGTG CCTGGAGGTG
CGCACCCCGG CCTACGCTTC GGTCGCGGAG CTCGCGCGGG CCCTGCCCGC GCTGCGGGCG
CGGGTGCGGC GCCTGGCCGA GCGCTCCGGC GCCCGGCTGG TCTCGGCGGG GGCCCACCCC
TTCAGCCCGG CCGCCGAGCA GCCCATAACC GGCAAGCCCC GCTACCGCAA GGTGGACGAG
GAGATGGGCT GGCCGGCCCG GATGCAGGCT ATCTACGGTC TGCACGTGCA CGTGGCGGTG
CCCGGCGGGG AGGAGGCGGT GCGGGCGGTC TCCGCGCTGG CCCGGCACGT GCCGCTGTTC
ATCGCGCTCT CGGCGAACTC CCCCTTCTGG GAGGGCCGGG ACACCCGCCT GGCCTCGGTG
CGGGCGAAGG TCTTCGGCCT GATCCCCCGC TCCGGCCTCC CCCCGCGCTT CGCCTCCTGG
GAGGAGTTCG TGCGCCACGT GGAGCGGCTG GTGCGCGCGG GCAGCATCCG GGACTACACG
TTCTGCTGGT GGGACGTGAG GCCCCACCCG AAGCTGGGCA CCGTGGAGCT GCGCGCCCCG
GACGCCCAGA CGGACCCCGG CCGCACCGCC GCGCTGGCCG CCCTGTGCCA GTGCCTCGCC
GCCGCCGCGG AGGAGTTCGA GCCCGAGGAC CCGCTGCTCA CGGAGGAGAA CAAGTGGCGC
GCGACGCGCC ACGGCCTGGA GGCCGAGCTC TACGACTTCT CGGGCCAGCG CACCGTCGCG
GCCCGCCGCG CGGCGGAGGA GCTGGTCGGC AGGCTCCTCC CCGTCGCCCG CGAGCTGGGC
TGCGAGGCCG AGCTGGAGGG GGTGCTGGAG ATCTCGCGCT CCGCCACCGG CGCCGACCGG
CAGCGGGCCG TCCTGGCGAG GGAGGGGTCC CTGAAGAGCG TGGTGGACTA CCTGGCAGAG
GCCACGGCCT AG
 
Protein sequence
METRFGASPP YTVGVEEEFQ LIDPRTRALT PKIEEVLAAG DGELPEGTLA SELSASCLEV 
RTPAYASVAE LARALPALRA RVRRLAERSG ARLVSAGAHP FSPAAEQPIT GKPRYRKVDE
EMGWPARMQA IYGLHVHVAV PGGEEAVRAV SALARHVPLF IALSANSPFW EGRDTRLASV
RAKVFGLIPR SGLPPRFASW EEFVRHVERL VRAGSIRDYT FCWWDVRPHP KLGTVELRAP
DAQTDPGRTA ALAALCQCLA AAAEEFEPED PLLTEENKWR ATRHGLEAEL YDFSGQRTVA
ARRAAEELVG RLLPVARELG CEAELEGVLE ISRSATGADR QRAVLAREGS LKSVVDYLAE
ATA