Gene Rxyl_1333 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRxyl_1333 
Symbol 
ID4116020 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRubrobacter xylanophilus DSM 9941 
KingdomBacteria 
Replicon accessionNC_008148 
Strand+ 
Start bp1359294 
End bp1359983 
Gene Length690 bp 
Protein Length229 aa 
Translation table11 
GC content72% 
IMG OID638036127 
Producthypothetical protein 
Protein accessionYP_644109 
Protein GI108804172 
COG category[R] General function prediction only 
COG ID[COG2129] Predicted phosphoesterases, related to the Icc protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.628119 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGCAAGC GGGTTGAGAG GGTTGTTGCC GCCTCCGGCG TGAGGGGCGA CGTAGAGCGG 
GTGGAGAGGT TGCTCGGCGC TGCGAGGGAG CGTCACGGGG CGGATGCGGT GGTGCTTCTC 
GGCGATCTCA GCGCGCGCGG GGAGGCCGAG GAGTACGCCG GCCTTCTGCG GGCTCTGGGC 
GAGGCCAACC TGCCGGCGTT CTACGTTCCG GGGCCGGGGG ACGCTCCCCT CGGGGGGTAT 
CTCAGGGAGG CCTACAACGC GGAGGTGGTC TTCCCGTTCC TGCACGGTGT GCACGGGAGC 
TTCGCCTTCG GTCCGGGCTA CGTGCTGTTT GCCGGGATGG GCGGCGAGGT GGTGGACGGG 
GCGCGGCCGG AGCGCGAGGA GGAGCGGCGG CTGCGCTACC CGGCCTGGGA GGCGGAGTAC 
CGGCTCAAGG TGCTCCACGA GCTCAGGGAC TACCGGCGGG TCTTTCTGCT CGGGACGCCG 
CCGGCGCACA AGGGCTTCGG GGAGGCCGGC AGCCAGACGC TCGCCGAGCT GGTGAAGACC 
CACTCGCCGC GGGTGGTGTT CGTGGGGGGT GCGGAGCATA TCCGGGAGGA GCTCGGCAGC 
TCGCTCGTGG TCTCGCCCGG GGCGCTTTCT GAGGGGCGGT ATGCCGTGGT CGGGATCTCG 
GGCCGGGAGG TCGAGCCGCA GCGGCTCTGA
 
Protein sequence
MRKRVERVVA ASGVRGDVER VERLLGAARE RHGADAVVLL GDLSARGEAE EYAGLLRALG 
EANLPAFYVP GPGDAPLGGY LREAYNAEVV FPFLHGVHGS FAFGPGYVLF AGMGGEVVDG 
ARPEREEERR LRYPAWEAEY RLKVLHELRD YRRVFLLGTP PAHKGFGEAG SQTLAELVKT 
HSPRVVFVGG AEHIREELGS SLVVSPGALS EGRYAVVGIS GREVEPQRL