| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rxyl_1330 |
|---|
| Symbol | |
|---|
| ID | 4116017 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rubrobacter xylanophilus DSM 9941 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008148 |
|---|
| Strand | + |
|---|
| Start bp | 1355891 |
|---|
| End bp | 1356988 |
|---|
| Gene Length | 1098 bp |
|---|
| Protein Length | 365 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 638036124 |
|---|
| Product | queuine tRNA-ribosyltransferase |
|---|
| Protein accession | YP_644106 |
|---|
| Protein GI | 108804169 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0343] Queuine/archaeosine tRNA-ribosyltransferase |
|---|
| TIGRFAM ID | [TIGR00430] tRNA-guanine transglycosylase, queuosine-34-forming
[TIGR00449] tRNA-guanine transglycosylases, various specificities |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.442991 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGGAGGCGG TCTGCGGGGC GGCGCGCGCC GGGCTTCTGC GCACGCCGCA CGGCGCGGTG
GAGACCCCCA CCTTCATGCC GGTGGGGACG AAGGGGGCGG TCAAGGGGCT CTCGCCGCGG
GACCTCGCGG AGATCGGGGC GGGCATCGTC CTCGGCAACA CCTACCACCT CTACCTGCGG
CCCGGCGCGG AGGTCGTCCG GGAGGCGGGG GGGCTGCACG AGTTCACCGG CTGGAGCGGC
CCGATGCTCA CCGACTCGGG CGGCTACCAG GTCTTCTCGC TGGCCAGGAT CCGGCGCCTC
TCCGAGGAGG GGGTGCGGTT CACCTCGGTC TACGACGGCT CGGTGCACGC CTTCACCCCG
GAGCTCGCCG TGCGGGTGCA GGAGGCCCTG GGGGCGGACG TGGCGATGGT GCTGGACGAG
TGCCCCCCGG CCGAGGCCGA CCGCGCCTAC CACGTGTCCT CGCTGCGCCG GACGGCGCGG
TGGGCGGCTC GCTGCAAGAA GGCCCACTCC CGCCCCGACC AGGCGCTCTT CGGGATCGTC
CAGGGCGGGC TGTACCCGGA CCTGCGGGAG GAGAGCCTCC GCAGGACGCT GGAGCTGGAC
TTCGACGGGT ACGCGGTGGG CGGGCTCTCC GTCGGCGAGC CGCGGGAGCG GATGCTGGAG
ATCCTCTCCC TGCTCACCCC CAGGCTCCCG GAGGACAGGC CCCGGTACTT CATGGGGATC
GGGGACCCGG TCGGGATCCT CGAGGTCATC GCGCTCGGGG TGGACATGTT CGACTGCGTG
CTCCCCACGC GCCTCGCCCG GCACGGCACC GCCCTGACCT CGGAGGGGAG GCTGAACCTG
AAGAACGCCC GCTACCGCCG GGACTTCGGC CCCCTCGACC CGGGGTGCCC CTGCGAGGCG
TGCGCGGGCT TCAGCCGCGC CTACCTCGCC CACCTGCTGC GGGAGAACGA GCTGCTCGGG
CACCGGCTGG TGAGCCTGCA CAACGTGCGC TTCGTGACCG AGCTCTGCCG CAGCGCCCGG
CGGGAGATCC TCGCCGGCAC CTACGCGGCG TGGATGCGCG GCTGGATCTC CCGTTACACC
GCCGCTAGAA GCGGGTGA
|
|---|
| Protein sequence | MEAVCGAARA GLLRTPHGAV ETPTFMPVGT KGAVKGLSPR DLAEIGAGIV LGNTYHLYLR
PGAEVVREAG GLHEFTGWSG PMLTDSGGYQ VFSLARIRRL SEEGVRFTSV YDGSVHAFTP
ELAVRVQEAL GADVAMVLDE CPPAEADRAY HVSSLRRTAR WAARCKKAHS RPDQALFGIV
QGGLYPDLRE ESLRRTLELD FDGYAVGGLS VGEPRERMLE ILSLLTPRLP EDRPRYFMGI
GDPVGILEVI ALGVDMFDCV LPTRLARHGT ALTSEGRLNL KNARYRRDFG PLDPGCPCEA
CAGFSRAYLA HLLRENELLG HRLVSLHNVR FVTELCRSAR REILAGTYAA WMRGWISRYT
AARSG
|
|---|
| |