Gene Rxyl_1326 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRxyl_1326 
Symbol 
ID4115993 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRubrobacter xylanophilus DSM 9941 
KingdomBacteria 
Replicon accessionNC_008148 
Strand
Start bp1352268 
End bp1353968 
Gene Length1701 bp 
Protein Length566 aa 
Translation table11 
GC content73% 
IMG OID638036120 
Productdihydroxy-acid dehydratase 
Protein accessionYP_644102 
Protein GI108804165 
COG category[E] Amino acid transport and metabolism
[G] Carbohydrate transport and metabolism 
COG ID[COG0129] Dihydroxyacid dehydratase/phosphogluconate dehydratase 
TIGRFAM ID[TIGR00110] dihydroxy-acid dehydratase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.303836 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAGACCA CGGACCTCAG GCGCAAGAGC CGCATCATGT TCGAGGGGCG GGACCGGGCC 
CCCGCCCGCT CCTACCTTCT GGGCATGGGC TACACTCGGG AGGACCTCGA GAAGCCCATC
GTGGGGGTGG CCCACTCCTG GATCGAGACC ATGCCCTGCA ACTACAACCA CCGCCGGCTG
GCCGAGAAGG TCAAGGAGGG CATCCGGGCG GCCGGGGGCA CCCCCATGGA GCTGAACACC
ATCGCGATCT CCGACGGGAT CACGATGGGC ACCCAGGGGA TGAAGACCTC CCTGGTCTCG
CGCGAGGTGA TCGCCGACTC CATCGAGCTG GTGGGGCGCG GCCACATGTT CGACGCCATG
GTGATCCTGG TCGGCTGCGA CAAGACCATC CCCGCCGGGG CGATGGCGCT GGCCCGGCTG
GACGTCCCCG GCATGGTCAT CTACTCCGGC TCCATAGCCC CGGGGCGCTT CAGGGGCCGC
GACGTGACCA TCCAGGACGT CTTCGAGGGG GTGGGCGCCC ACGCCGCGGG CAAGATGAGC
GACGAGGAGC TGCGGGAGCT GGAGGAGGGG GCCTGCCCGG GCGCGGGGGC CTGCGGCGGC
CAGTACACCG CCAACACCAT GGCCATAGCG CTGCAGTTTT TGGGCCTCTC GCCGGTGGGC
TCCGCCGACC CGCCCGCCCT GGACGGCCGC AAGGAGGCGG TCTGCGAGGA GGCGGGCCGG
CTGGTGATGC GCCTGCTGGA GCGGGACCTC AAGCCCTCGG ACATCCTGAG CCGCGCGGCC
TTCGAGAACG CCATCGCCTC CGTGGCCGCT ACCGGGGGCT CCACCAACGC GGTGCTCCAC
TTCCTCGCCC TCGCCCAGGA GGCGGGCATC CCGCTGGACA TAGAGGACTT CGACCGGGTC
AGCTCCCGCA CCCCCATCAT CGCGGACCTG AAGCCCGGCG GCCGCTTTAC GGCCGTGGAC
ATGGACCGCG CAGGGGGCTC CCGGCTGCTG GGCGCGCGGA TGCTGGAGGC GAACCTCGTG
GACGGCTCCC AGCCCACCGT CACCGGGCGC ACCCTGGCCG AGGAGTTCGA GGGCGCGCGG
GAGCGCCCGG GGCAGGAGGT GATCCTCTCC GCCGAGAGGT CCCTCAGCGA GAGCGGCGGC
CTGGTGATCC TCAAGGGCAA CCTGGCCCCC GAGGGCTGCG TGGTGAAGGT CGCGGGCTAC
ACCCGCCGCC GCCACGAGGG TCCGGCGCGC GTCTTCGACT CCGAGGAGCA GGCGATGGAG
GCGGTCCAGG CCGGCCGGAT CTCGGCGGGC GACGTGGTGG TGATCCGCTA CGAGGGGCCG
CGCGGCGGCC CCGGGATGCG CGAGATGCTG GGGGTGACCG CCGCGCTGGT GGGCCAGGGG
CTCGGCGAGA GCGTGGCGCT GCTAACCGAC GGGCGCTTCT CAGGGGCCAC CCGCGGGCTC
ATGGTGGGCC ACGTCGCCCC GGAGGCGGCC CGCGGCGGCC CCATAGCCGC CCTGCGCGAC
GGGGACCGCA TCACGATCGA CGTCACCGGC AGGACGCTGA GCGTGGCGCT CACCGGCGAG
GAGCTGCGGA GGCGCCTGGA GAACTGGCGG GAGCCCGAGC CGCGCTTCAG GCTCGGGGTG
ATGGCCAAGT ACGCCGCCCT CGTCTCCTCG GCCTCCGAGG GGGCGGTGAC CGTCCCGGAC
TGGCAGCGCC GCGCCACCTG A
 
Protein sequence
MQTTDLRRKS RIMFEGRDRA PARSYLLGMG YTREDLEKPI VGVAHSWIET MPCNYNHRRL 
AEKVKEGIRA AGGTPMELNT IAISDGITMG TQGMKTSLVS REVIADSIEL VGRGHMFDAM
VILVGCDKTI PAGAMALARL DVPGMVIYSG SIAPGRFRGR DVTIQDVFEG VGAHAAGKMS
DEELRELEEG ACPGAGACGG QYTANTMAIA LQFLGLSPVG SADPPALDGR KEAVCEEAGR
LVMRLLERDL KPSDILSRAA FENAIASVAA TGGSTNAVLH FLALAQEAGI PLDIEDFDRV
SSRTPIIADL KPGGRFTAVD MDRAGGSRLL GARMLEANLV DGSQPTVTGR TLAEEFEGAR
ERPGQEVILS AERSLSESGG LVILKGNLAP EGCVVKVAGY TRRRHEGPAR VFDSEEQAME
AVQAGRISAG DVVVIRYEGP RGGPGMREML GVTAALVGQG LGESVALLTD GRFSGATRGL
MVGHVAPEAA RGGPIAALRD GDRITIDVTG RTLSVALTGE ELRRRLENWR EPEPRFRLGV
MAKYAALVSS ASEGAVTVPD WQRRAT