Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rxyl_1326 |
Symbol | |
ID | 4115993 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rubrobacter xylanophilus DSM 9941 |
Kingdom | Bacteria |
Replicon accession | NC_008148 |
Strand | - |
Start bp | 1352268 |
End bp | 1353968 |
Gene Length | 1701 bp |
Protein Length | 566 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 638036120 |
Product | dihydroxy-acid dehydratase |
Protein accession | YP_644102 |
Protein GI | 108804165 |
COG category | [E] Amino acid transport and metabolism [G] Carbohydrate transport and metabolism |
COG ID | [COG0129] Dihydroxyacid dehydratase/phosphogluconate dehydratase |
TIGRFAM ID | [TIGR00110] dihydroxy-acid dehydratase |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.303836 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAGACCA CGGACCTCAG GCGCAAGAGC CGCATCATGT TCGAGGGGCG GGACCGGGCC CCCGCCCGCT CCTACCTTCT GGGCATGGGC TACACTCGGG AGGACCTCGA GAAGCCCATC GTGGGGGTGG CCCACTCCTG GATCGAGACC ATGCCCTGCA ACTACAACCA CCGCCGGCTG GCCGAGAAGG TCAAGGAGGG CATCCGGGCG GCCGGGGGCA CCCCCATGGA GCTGAACACC ATCGCGATCT CCGACGGGAT CACGATGGGC ACCCAGGGGA TGAAGACCTC CCTGGTCTCG CGCGAGGTGA TCGCCGACTC CATCGAGCTG GTGGGGCGCG GCCACATGTT CGACGCCATG GTGATCCTGG TCGGCTGCGA CAAGACCATC CCCGCCGGGG CGATGGCGCT GGCCCGGCTG GACGTCCCCG GCATGGTCAT CTACTCCGGC TCCATAGCCC CGGGGCGCTT CAGGGGCCGC GACGTGACCA TCCAGGACGT CTTCGAGGGG GTGGGCGCCC ACGCCGCGGG CAAGATGAGC GACGAGGAGC TGCGGGAGCT GGAGGAGGGG GCCTGCCCGG GCGCGGGGGC CTGCGGCGGC CAGTACACCG CCAACACCAT GGCCATAGCG CTGCAGTTTT TGGGCCTCTC GCCGGTGGGC TCCGCCGACC CGCCCGCCCT GGACGGCCGC AAGGAGGCGG TCTGCGAGGA GGCGGGCCGG CTGGTGATGC GCCTGCTGGA GCGGGACCTC AAGCCCTCGG ACATCCTGAG CCGCGCGGCC TTCGAGAACG CCATCGCCTC CGTGGCCGCT ACCGGGGGCT CCACCAACGC GGTGCTCCAC TTCCTCGCCC TCGCCCAGGA GGCGGGCATC CCGCTGGACA TAGAGGACTT CGACCGGGTC AGCTCCCGCA CCCCCATCAT CGCGGACCTG AAGCCCGGCG GCCGCTTTAC GGCCGTGGAC ATGGACCGCG CAGGGGGCTC CCGGCTGCTG GGCGCGCGGA TGCTGGAGGC GAACCTCGTG GACGGCTCCC AGCCCACCGT CACCGGGCGC ACCCTGGCCG AGGAGTTCGA GGGCGCGCGG GAGCGCCCGG GGCAGGAGGT GATCCTCTCC GCCGAGAGGT CCCTCAGCGA GAGCGGCGGC CTGGTGATCC TCAAGGGCAA CCTGGCCCCC GAGGGCTGCG TGGTGAAGGT CGCGGGCTAC ACCCGCCGCC GCCACGAGGG TCCGGCGCGC GTCTTCGACT CCGAGGAGCA GGCGATGGAG GCGGTCCAGG CCGGCCGGAT CTCGGCGGGC GACGTGGTGG TGATCCGCTA CGAGGGGCCG CGCGGCGGCC CCGGGATGCG CGAGATGCTG GGGGTGACCG CCGCGCTGGT GGGCCAGGGG CTCGGCGAGA GCGTGGCGCT GCTAACCGAC GGGCGCTTCT CAGGGGCCAC CCGCGGGCTC ATGGTGGGCC ACGTCGCCCC GGAGGCGGCC CGCGGCGGCC CCATAGCCGC CCTGCGCGAC GGGGACCGCA TCACGATCGA CGTCACCGGC AGGACGCTGA GCGTGGCGCT CACCGGCGAG GAGCTGCGGA GGCGCCTGGA GAACTGGCGG GAGCCCGAGC CGCGCTTCAG GCTCGGGGTG ATGGCCAAGT ACGCCGCCCT CGTCTCCTCG GCCTCCGAGG GGGCGGTGAC CGTCCCGGAC TGGCAGCGCC GCGCCACCTG A
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Protein sequence | MQTTDLRRKS RIMFEGRDRA PARSYLLGMG YTREDLEKPI VGVAHSWIET MPCNYNHRRL AEKVKEGIRA AGGTPMELNT IAISDGITMG TQGMKTSLVS REVIADSIEL VGRGHMFDAM VILVGCDKTI PAGAMALARL DVPGMVIYSG SIAPGRFRGR DVTIQDVFEG VGAHAAGKMS DEELRELEEG ACPGAGACGG QYTANTMAIA LQFLGLSPVG SADPPALDGR KEAVCEEAGR LVMRLLERDL KPSDILSRAA FENAIASVAA TGGSTNAVLH FLALAQEAGI PLDIEDFDRV SSRTPIIADL KPGGRFTAVD MDRAGGSRLL GARMLEANLV DGSQPTVTGR TLAEEFEGAR ERPGQEVILS AERSLSESGG LVILKGNLAP EGCVVKVAGY TRRRHEGPAR VFDSEEQAME AVQAGRISAG DVVVIRYEGP RGGPGMREML GVTAALVGQG LGESVALLTD GRFSGATRGL MVGHVAPEAA RGGPIAALRD GDRITIDVTG RTLSVALTGE ELRRRLENWR EPEPRFRLGV MAKYAALVSS ASEGAVTVPD WQRRAT
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