Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rxyl_1318 |
Symbol | |
ID | 4115985 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rubrobacter xylanophilus DSM 9941 |
Kingdom | Bacteria |
Replicon accession | NC_008148 |
Strand | + |
Start bp | 1347357 |
End bp | 1348109 |
Gene Length | 753 bp |
Protein Length | 250 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 638036112 |
Product | hypothetical protein |
Protein accession | YP_644094 |
Protein GI | 108804157 |
COG category | [S] Function unknown |
COG ID | [COG0217] Uncharacterized conserved protein |
TIGRFAM ID | [TIGR01033] DNA-binding regulatory protein, YebC/PmpR family |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0714247 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCGGTC ATAGCAAGTG GTCCACGATA AAGCGGAAGA AGGGCGCGAT GGACGCCAAG CGCGGCGCCC TGTTCGCCAA GCTCTCCCGG GCCATCACGG TCGCCGCCCG GGAGGGCGGG GGAGACCCCG AGGCGAACCC CGCGCTGGCC CTCGCCGTGC AGAAGGCCAA GGACGCCAAC ATGCCGAACG ACAACATCCA GCGGGCTATA GACCGCGGGA CCGGCGCGGG CTCGGAGGCG GGCGACTACG AGCACATAAC CTACGAGGGC TACGCCCCGG GCGGGGTCGC GGTGATGGTG GAGGTGCTCA CCGACAACCG GAACCGGGCG GCCTCGGACA TCCGCTACAT CTTCTCCAAG CACGGCGGCA AGCTCGGCAC CTCCGGCTCG GTGGCCTACC TGTTCGAGCG GAAGGGCGTC GTCTTGGTCC CCGCCGACGC GGTGGGCGAG GAGGAGCTCA TGGAGGCCGC GCTGGAGGCG GGGGCCGAGG ACGTGGAGCT GGACGGCGAC CACTGGCGGG TCACGACCGA GCCCTCGGAG TTCATGGCCG TCCGCCAGGG GCTCGAGGAG GCGGGCATCC GCTACGAGAG CGCCCAGCTC TCCATGGAGC CCATGAACAC GGTGAAGCTC GACGCCTCCA CGGCGAGGCA GACCCTCCGC CTCATAGACG CCCTGGAGGA GAACGACGAC GTGCAGGAGG TCTACGCCAA CTTCGATATC TCGGAGGAGG TGATGGCGGA GGTGGCGGGC TAG
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Protein sequence | MSGHSKWSTI KRKKGAMDAK RGALFAKLSR AITVAAREGG GDPEANPALA LAVQKAKDAN MPNDNIQRAI DRGTGAGSEA GDYEHITYEG YAPGGVAVMV EVLTDNRNRA ASDIRYIFSK HGGKLGTSGS VAYLFERKGV VLVPADAVGE EELMEAALEA GAEDVELDGD HWRVTTEPSE FMAVRQGLEE AGIRYESAQL SMEPMNTVKL DASTARQTLR LIDALEENDD VQEVYANFDI SEEVMAEVAG
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