| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rxyl_1310 |
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| Symbol | |
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| ID | 4115977 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rubrobacter xylanophilus DSM 9941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008148 |
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| Strand | - |
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| Start bp | 1333562 |
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| End bp | 1335676 |
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| Gene Length | 2115 bp |
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| Protein Length | 704 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 638036101 |
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| Product | penicillin-binding protein 1A |
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| Protein accession | YP_644086 |
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| Protein GI | 108804149 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0744] Membrane carboxypeptidase (penicillin-binding protein) |
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| TIGRFAM ID | [TIGR02074] penicillin-binding protein, 1A family |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.028236 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTCGCA CCTACCAGAG AAGACCTGGG CGGGGGGACA GAAGAGCCAG AGATCCGAAG
CGGCAGAGGG ACCGAAGGGT CCGGTTCCCC TACGAGGCCA GAAAGCCGCG CTCGCGGTTC
GGGGCGGCGC GGGAGGCCGC GCTGCGGGCT CTCGGGGTGC TCCTGCTCAC CGGGTTCGTC
GCGGGCGTGG CGTTCGCCGC GGGAGCCTAC CTGGGGCTCG TCAAGAGCGT CCGCCAGCTG
GAGCCGCCGC CGGTGACCGA GTCCCACCCG ACGTATATAT ATTCGGCCCC GCTCGGCGAG
GGCGACGGTT CCAGGCGGGT GATAGGGACC ATCTTCCAGG GGGAGAACCG GCAGACCATC
CCGAAGTCCC AGATGCCGCC GCACCTGCTC AACGCGCTCG TCGCCAAAGA GGACGAACGC
TTTATGCAGC ATCCCGGCGT GGACCTGTGG GGCATCATGC GGGCGCTGTG GGTGGACATC
CGGGCCGGCA GGTACGTGGA GGGGGCCTCC ACCATAACCC AGCAGTACGT GCGCAACGTC
TACCTCTCCC GGGAGCAGTC CATAACCCGC AAGATAAAAG AGGCCCTCAT CGCCGTACAG
ATAGAGACGG TGAAGGACAA GGAGGAGATC CTGGCGGACT ACCTCAACAC CGTCTACTTC
GGGAACAACG CCTACGGCGT GGAGGCCGCC GCCGAGACCT ACTTCAACAA GAGCACCGAG
GACCTCACGA TAGCCGAGTC CGCCACCCTC GTGGGGCTGC TCTGGTCGCC CTCCACGCTG
GGGGACGACA AGGAGGCGGC AAAGAAGCAG CGGGACCTGG TGCTCAAGAA GATGTTCGAC
GCCGGCTACA TAACGCGGCA GGACTACGAG AGCGCCCTCG AGGAGCCGAT GCCCGAGGAC
TGGCCGCAGG CCCCGATGCT CGAGACGGGG CTCACCGGCC CGCCGCTCAC CCGGGAGTTC
GCCGAGCTGG TGCAGGACGA GCTGATCCGG CGCTACGGGG CGAACACCGT GCTCAGAGGG
GGACTCGACG TCTACACCAC GCTGGACCTC GAGCAGCAGA TGGCGGCCTA CGAGGTGCTC
TACGGCCCCA ACGGGTACCT GCCGTCGCCC GAGCAACCGG ACGGGGCGCT GGTCTCCATA
AACCCCGAGA CCGGGCACAT AACCGCGATG GTCGGCAACA GGGATCCCGA GTCCCAGTTC
AACCTGGTGA CCCAGGCGCG CCGGCAGCCG GGCAGCTCGT TCAAGCCCTT CGCCCTCATC
GCGGCGCTGG AGCAGGGCAT AGACCCGGAC ACCCACTTCA TATCGGAGAA GAAGGTCTAC
CAGGTGCCCA AGGGCAACGG GCAGACCGAG CGCTGGAAGG TGGAGAACTA CGAGAAGATC
GAAAGGGGCT CCATCTCCCT GAAGGAGGCG CTCTGGGAGT CGGACAACAC GGTGTTCACG
GACCTGGTGA TGAACGCCGG GGGCAAGGGC CTGAAGAACG GTCCCGAAGC GGTCGCCGAC
GTCGCCCGGC GGCTCGGGGT CTCGGCGGAC TTCGGGGAGC ACCCGGACCC CTCGATCGTG
CTCGGGGCCT ACGAGGTCTC GCCGCTGGAC ATGGCGACGG CCTACGCGAC CATAGCCAAC
GGGGGGCGCA GGGTGGAGCC CACGCTCATA GAGAAGGTCG TCCGAAACGA GGGCCAGGAG
GGCGAGGAGG TGCTCTTCCG GGCCCCGGAG CACCCCCTGG GCCGGCAGGT CATAGACCCG
GAGATCGCCC GCGAGGCGAT CGGGATCATG ATGGGCGACG TGATGTGGGG CATCGCGGGG
GACGCGGCGC TCCCCGGCCG CCAGGTGGCC GGCAAGACGG GGACCAGCGA GAACTTCTTC
GACTCCTGGT TTATCGGGTT CACGCCGCAG CTGACGACGG CGGTGTGGAT GGGCTACGCC
GAGGGCGGCA AGACCCTGGA GGAGCTGCTG AGCCGCGACG GCGCGCTCTA CGGCACGGTG
GGCTCGCCGG AGGAGATCTG GCACGACTAC ATGCTGCAGG CGCTCGACGG CGAGCCGGTG
GAGCGCTTTG AGGGGGTGGA GGAGCCCCCG CCCCCGGAGG ACGAGGACGC CCCGGCCGCT
ACGCGGGTTC CCTGA
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| Protein sequence | MARTYQRRPG RGDRRARDPK RQRDRRVRFP YEARKPRSRF GAAREAALRA LGVLLLTGFV
AGVAFAAGAY LGLVKSVRQL EPPPVTESHP TYIYSAPLGE GDGSRRVIGT IFQGENRQTI
PKSQMPPHLL NALVAKEDER FMQHPGVDLW GIMRALWVDI RAGRYVEGAS TITQQYVRNV
YLSREQSITR KIKEALIAVQ IETVKDKEEI LADYLNTVYF GNNAYGVEAA AETYFNKSTE
DLTIAESATL VGLLWSPSTL GDDKEAAKKQ RDLVLKKMFD AGYITRQDYE SALEEPMPED
WPQAPMLETG LTGPPLTREF AELVQDELIR RYGANTVLRG GLDVYTTLDL EQQMAAYEVL
YGPNGYLPSP EQPDGALVSI NPETGHITAM VGNRDPESQF NLVTQARRQP GSSFKPFALI
AALEQGIDPD THFISEKKVY QVPKGNGQTE RWKVENYEKI ERGSISLKEA LWESDNTVFT
DLVMNAGGKG LKNGPEAVAD VARRLGVSAD FGEHPDPSIV LGAYEVSPLD MATAYATIAN
GGRRVEPTLI EKVVRNEGQE GEEVLFRAPE HPLGRQVIDP EIAREAIGIM MGDVMWGIAG
DAALPGRQVA GKTGTSENFF DSWFIGFTPQ LTTAVWMGYA EGGKTLEELL SRDGALYGTV
GSPEEIWHDY MLQALDGEPV ERFEGVEEPP PPEDEDAPAA TRVP
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