Gene Rxyl_1309 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRxyl_1309 
Symbol 
ID4115976 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRubrobacter xylanophilus DSM 9941 
KingdomBacteria 
Replicon accessionNC_008148 
Strand+ 
Start bp1333006 
End bp1333578 
Gene Length573 bp 
Protein Length190 aa 
Translation table11 
GC content76% 
IMG OID638036100 
ProductDNA-3-methyladenine glycosylase 
Protein accessionYP_644085 
Protein GI108804148 
COG category[L] Replication, recombination and repair 
COG ID[COG2094] 3-methyladenine DNA glycosylase 
TIGRFAM ID[TIGR00567] DNA-3-methyladenine glycosylase (3mg) 


Plasmid Coverage information

Num covering plasmid clones9 
Plasmid unclonability p-value0.0425543 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGACCTGC TGGGCTGCGT CCTCGTCAGC GAGACGCCGG AGGGCACCTG CTCCGGGGTG 
ATCGTCGAGA CGGAGGCCTA CCGCCCGGAG GACCCCGCGT GCCACGCCTA CCGGGGACCC 
TCGATGCGCA ACCGGACCCT GTTCGGGGGG CCGGGGCTCG CCTACGTCTA CCTCTCCTAC 
GGCATGCACC GCCTGCTGAA CGCGGTCTGC GAGGGGGAGG GGGTGGGGAG CGCCGTCCTC 
ATCCGGTCGC TAGCCCCGCT GGAGGGCGTC CCGCTGATGC GGCGGCGCCG GGGGAGGGCC 
GCCGACCTCT GCAACGGCCC GGGCCGCCTC GCCGAGTCCC TCGGGGTGGG GCTCTCCCTC 
GACGGGCACG ACCTCACCCT GGGGGAGGGG CTCTACATCG CGCCCGGGCC CCCGCCGCGC 
GGCGAGATCG TCTCCACCAC CCGGATCGGC GTCAGCCGCG GCGCGGAGCT GCCCTGGCGC 
TACCTCGTGC TCGGGGAGCG GGTCTCCGTC CCGCCCCGGC GGATCTCGGG CCGGGGGCTC 
CGGCGCGCGT GGAACGTCAG GGAACCCGCG TAG
 
Protein sequence
MDLLGCVLVS ETPEGTCSGV IVETEAYRPE DPACHAYRGP SMRNRTLFGG PGLAYVYLSY 
GMHRLLNAVC EGEGVGSAVL IRSLAPLEGV PLMRRRRGRA ADLCNGPGRL AESLGVGLSL 
DGHDLTLGEG LYIAPGPPPR GEIVSTTRIG VSRGAELPWR YLVLGERVSV PPRRISGRGL 
RRAWNVREPA