| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rxyl_1290 |
|---|
| Symbol | |
|---|
| ID | 4116953 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rubrobacter xylanophilus DSM 9941 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008148 |
|---|
| Strand | - |
|---|
| Start bp | 1312751 |
|---|
| End bp | 1313728 |
|---|
| Gene Length | 978 bp |
|---|
| Protein Length | 325 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 638036078 |
|---|
| Product | malate dehydrogenase |
|---|
| Protein accession | YP_644066 |
|---|
| Protein GI | 108804129 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0039] Malate/lactate dehydrogenases |
|---|
| TIGRFAM ID | [TIGR01759] malate dehydrogenase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGTCGAAGA CCGTCACCGT CACCGGCGCC GCGGGCGCCA TCGGGTACGC GATCCTGTTC
AGGATAGCCT CGGGCCAGAT GCTCGGCCCC GACCAGAAGC TGCGCCTGAA GCTTCTGGAG
ATAGAGCCCG CCCTCAAGGC CGCCGAGGGG ACCGCGATGG AGCTCTACGA CTGCGCCTTT
CCGCTGCTCG AGGCCGTAGA CATCACCGCC GACCCGAAGG AGGCCTTCGA CGGCGCGAAC
GTCTGCCTGC TCATCGGCGC CCGGCCGCGC CAGAGGGGTA TGGAGCGCGC CGACCTCCTG
GAGGCGAACG GCCAGATCTT CAAGCCCCAG GGCCGGGCCA TCAACGACCA CGCCGCCGAC
GACGTGCGCG TGCTGGTGGT CGGCAACCCG GCCAACACGA ACTGCCTGAT CGCGATGAAC
AACGCCCCGG ACGTCCCGCG CGAGCGCTTC AGCGCGATGA CCCGCCTCGA CGAGAACCGC
GCGGTCTCGA TGCTCGCCCA GAAGCTCGGC GTCGGCGTGG AGGACGTGCG GGACCTCGTC
GTCTGGGGCA ACCACTCCCC CACCATGTTC CCCGACCTCT TCAACGCCAG GGTGAAGGGC
CAGCGGGCCG TGGACCTGGT GGAGATGGAG TGGTACGAGA ACGAGTACAT CCCGCGCGTC
GGCAAGCGCG GCGCGGAGAT CATCGAGGCG CGCGGCGCCT CCTCGGCCGC CTCGGCGGCC
AACGCCGCCA TAGACCACGT GCGCGACTGG ATGCTCGGGG CCGACAGCCT CCACTCCATG
GCCGTCGCCT CGAGCGGCCA GTACGGCGTC GAGGAGGGGC TCGTCTCCTC GTTCCCGGTG
CGGCTGCCGG GAGGGGGCGA GTACGAGATC CCCGAGGGGC TCGAGGTCGG GGACTTCGCG
CGCTCGAAGC TCGAGATCAC CATCGGCGAG CTCAAGGAGG AGCGCGACGC GGTGAGGAAG
CTCGGCCTGA TCGGCTGA
|
|---|
| Protein sequence | MSKTVTVTGA AGAIGYAILF RIASGQMLGP DQKLRLKLLE IEPALKAAEG TAMELYDCAF
PLLEAVDITA DPKEAFDGAN VCLLIGARPR QRGMERADLL EANGQIFKPQ GRAINDHAAD
DVRVLVVGNP ANTNCLIAMN NAPDVPRERF SAMTRLDENR AVSMLAQKLG VGVEDVRDLV
VWGNHSPTMF PDLFNARVKG QRAVDLVEME WYENEYIPRV GKRGAEIIEA RGASSAASAA
NAAIDHVRDW MLGADSLHSM AVASSGQYGV EEGLVSSFPV RLPGGGEYEI PEGLEVGDFA
RSKLEITIGE LKEERDAVRK LGLIG
|
|---|
| |