Gene Rxyl_1278 details

Gene Information

• Locus tag: Rxyl_1278
• ID: 4116004
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Rubrobacter xylanophilus DSM 9941
• Kingdom: Bacteria
• Replicon accession: NC_008148
• Strand: +
• Start bp: 1303552
• End bp: 1304241
• Gene Length: 690 bp
• Protein Length: 229 aa
• Translation table: 11
• GC content: 72%
• IMG OID: 638036066
• Product: hypothetical protein
• Protein accession: YP_644054
• Protein GI: 108804117
• COG category: [R] General function prediction only
• COG ID: [COG1811] Uncharacterized membrane protein, possible Na+ channel or pump

Plasmid Coverage information

• Num covering plasmid clones: 16
• Plasmid unclonability p-value: 0.856375
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACGGGGA CCGCCATCAA CGTCGCCGCG GTGCTCGCGG GCGGTGGGAT CGGGGTGGTG 
CTGGGGGCCA GGCTCCCCGA GGGCCTGCGG CGGGCGGCGA TGCAGGCTAT AGGGGTCGTA 
ACGCTGCTCG TCGGCGTCCA GAACTTCCTC GAGCACGACA ACCCCCTGGT TCCGCTCGTC 
AGCGTGATCC TGGGGCTTTT TGCGGGCGAG CTGCTGCGGA TAGAGAAGCG CCTGCAAGCC 
TTCGGGGACC GCCTGGAGGG GCGCCTCTCC CGCGGGGAGA GCCCGGTGAG CCGGGCCTTC 
GTGACCACGA GCCTGCTGTT CTGCGTGGGG CCCCTCACGG TGATAGGCTC CCTGCAGGAC 
GGGCTGACCG GCGACTACGG GCTCCTGGCG CTCAAGAGCG CCCTGGACTT CATCGCCGCC 
CTCGCCTTCG CCTCCGTGCT GGGGTGGGGG GTCCTCCTCT CCGCCGGCAC GGTGCTCGTG 
GTGCAGGGGT CGCTCACCCT CGGGGCCGGG CTCGTGGAGG GATTCGCCAC CGACGCCGCG 
ATCTCCGCCA CCACGGCCAC CGGCGGCGTC CTCATCTTCG GCCTCGGGCT CTCCCTGCTG 
GAGCTGCGGG AGGTGCCGGT GGCGAACATG CTCCCCGCCC TCCTGGTCGC CCCCCTGCTC 
GTCGTGGCGG CCCCGCTGTG GCCGCTGTGA 

 

Protein sequence

MTGTAINVAA VLAGGGIGVV LGARLPEGLR RAAMQAIGVV TLLVGVQNFL EHDNPLVPLV 
SVILGLFAGE LLRIEKRLQA FGDRLEGRLS RGESPVSRAF VTTSLLFCVG PLTVIGSLQD 
GLTGDYGLLA LKSALDFIAA LAFASVLGWG VLLSAGTVLV VQGSLTLGAG LVEGFATDAA 
ISATTATGGV LIFGLGLSLL ELREVPVANM LPALLVAPLL VVAAPLWPL