Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rxyl_1261 |
Symbol | |
ID | 4116419 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rubrobacter xylanophilus DSM 9941 |
Kingdom | Bacteria |
Replicon accession | NC_008148 |
Strand | - |
Start bp | 1280927 |
End bp | 1281655 |
Gene Length | 729 bp |
Protein Length | 242 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 638036049 |
Product | beta-lactamase-like protein |
Protein accession | YP_644037 |
Protein GI | 108804100 |
COG category | [R] General function prediction only |
COG ID | [COG2220] Predicted Zn-dependent hydrolases of the beta-lactamase fold |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.191714 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGTGCAGG AGATGCTCGG CGGGACCAGG ATAACCTACC TCGGCCACGC GACCTTCAGG CTGACCACCC CGGGCGGGGA GAACATCCTC ATCGACCCCT TTCTCGCGGA CAACCCCCAG ACCCCCGAGG AGCTCAAGCA GGTCGGCGAC CTCGACACCA TCCTCGTGAC CCACGGGCAC TTCGACCACT TCGCCGACGC CATCCCCGTG GCGCGCCAGA CCGGGGCTAC GGTGGTGGCG AACTTCGAGA TCTCCTCCTA CGTCCAGAGC CAGGGCATAG AGAACTCCAT GCCCCTCAAC AAGGGCGGCA CCGCCCGGGT CGGCGGGGTG AAGGTCACCG GCACCAACGC CTTTCACGCC TCCTCGATCC AGACGGAGGA CGGCTCCACG ATCTACGGCG GCGAGCCGAT GGGCTTCGTG GTGGAGTTCG AGAGCGGCTT CAAGGTCTAC CACGCCGGGG ACACCGCCGT CTTCGGGGAC ATGCGCCTGA TCGGGGAGCT CTACGGCCCG GACCTGGCGC TCCTGCCGAT CGGCGACCGG GTGGTGATGA GCCCCTTCGA GGCGGCCCAC GCGGCCCGGC TGCTCGGCGT GCGGCACGTG GTCCCGATGC ACTACGGAAC CTTCCCGTTC CTGCCGGGCA CCCCGGAGGA GTTCGAGCGC CACGCCAGGG AGCTGGGCCT GGAGCTGGAG ATCCACGTGA TGAAGCCCGG GGAGGAGCTG GGCTCCTAG
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Protein sequence | MVQEMLGGTR ITYLGHATFR LTTPGGENIL IDPFLADNPQ TPEELKQVGD LDTILVTHGH FDHFADAIPV ARQTGATVVA NFEISSYVQS QGIENSMPLN KGGTARVGGV KVTGTNAFHA SSIQTEDGST IYGGEPMGFV VEFESGFKVY HAGDTAVFGD MRLIGELYGP DLALLPIGDR VVMSPFEAAH AARLLGVRHV VPMHYGTFPF LPGTPEEFER HARELGLELE IHVMKPGEEL GS
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