Gene Rxyl_1261 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRxyl_1261 
Symbol 
ID4116419 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRubrobacter xylanophilus DSM 9941 
KingdomBacteria 
Replicon accessionNC_008148 
Strand
Start bp1280927 
End bp1281655 
Gene Length729 bp 
Protein Length242 aa 
Translation table11 
GC content68% 
IMG OID638036049 
Productbeta-lactamase-like protein 
Protein accessionYP_644037 
Protein GI108804100 
COG category[R] General function prediction only 
COG ID[COG2220] Predicted Zn-dependent hydrolases of the beta-lactamase fold 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.191714 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTGCAGG AGATGCTCGG CGGGACCAGG ATAACCTACC TCGGCCACGC GACCTTCAGG 
CTGACCACCC CGGGCGGGGA GAACATCCTC ATCGACCCCT TTCTCGCGGA CAACCCCCAG
ACCCCCGAGG AGCTCAAGCA GGTCGGCGAC CTCGACACCA TCCTCGTGAC CCACGGGCAC
TTCGACCACT TCGCCGACGC CATCCCCGTG GCGCGCCAGA CCGGGGCTAC GGTGGTGGCG
AACTTCGAGA TCTCCTCCTA CGTCCAGAGC CAGGGCATAG AGAACTCCAT GCCCCTCAAC
AAGGGCGGCA CCGCCCGGGT CGGCGGGGTG AAGGTCACCG GCACCAACGC CTTTCACGCC
TCCTCGATCC AGACGGAGGA CGGCTCCACG ATCTACGGCG GCGAGCCGAT GGGCTTCGTG
GTGGAGTTCG AGAGCGGCTT CAAGGTCTAC CACGCCGGGG ACACCGCCGT CTTCGGGGAC
ATGCGCCTGA TCGGGGAGCT CTACGGCCCG GACCTGGCGC TCCTGCCGAT CGGCGACCGG
GTGGTGATGA GCCCCTTCGA GGCGGCCCAC GCGGCCCGGC TGCTCGGCGT GCGGCACGTG
GTCCCGATGC ACTACGGAAC CTTCCCGTTC CTGCCGGGCA CCCCGGAGGA GTTCGAGCGC
CACGCCAGGG AGCTGGGCCT GGAGCTGGAG ATCCACGTGA TGAAGCCCGG GGAGGAGCTG
GGCTCCTAG
 
Protein sequence
MVQEMLGGTR ITYLGHATFR LTTPGGENIL IDPFLADNPQ TPEELKQVGD LDTILVTHGH 
FDHFADAIPV ARQTGATVVA NFEISSYVQS QGIENSMPLN KGGTARVGGV KVTGTNAFHA
SSIQTEDGST IYGGEPMGFV VEFESGFKVY HAGDTAVFGD MRLIGELYGP DLALLPIGDR
VVMSPFEAAH AARLLGVRHV VPMHYGTFPF LPGTPEEFER HARELGLELE IHVMKPGEEL
GS