Gene Rxyl_1254 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRxyl_1254 
Symbol 
ID4116412 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRubrobacter xylanophilus DSM 9941 
KingdomBacteria 
Replicon accessionNC_008148 
Strand
Start bp1276042 
End bp1277085 
Gene Length1044 bp 
Protein Length347 aa 
Translation table11 
GC content71% 
IMG OID638036042 
Producthypothetical protein 
Protein accessionYP_644030 
Protein GI108804093 
COG category[S] Function unknown 
COG ID[COG2339] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTATACTG CGCCCCATGC GGAAGGGGTC TGTGGACAGG TGAGCGGGGC GCTCGTCGGG 
ATAGGGGTCC TGCAGTCCCT CGTCTATCTG GCCTTTATCC GGTTCGTCGA CCTCTACGAG
CGGGAGCCGC TCCGGTACGT GGTCCCGGTC TTTCTGTGGG GCTTCACGGT GGCGGTGTCC
GTCTCGCTCT TCTTCAACAC CCTCTTTCAG GTCGCGGTCA GCCAGATCTC GACGATGCAG
GTGGCGGGAT TCCTGACGGC GGTGGTGGCC GCCCCCGTGG TGGAGGAGTG TTCGAAGGGG
ATGGCCCTGT TTCTGGTGTT TGTGGTCTCC TACGCGGCCT CCCGGCGGCG CGGGGTGGTG
GAGTTCTCGG GGGTGATGGA CGGCATCGTC TACGGCTCGG CGGTGGGCTT CGGGTTCTCG
CTGGCCGAGG ACCTGCTCTA CTACGCCCAG TTCGGCCCCG AGACCTACGC GGTGCGCAGG
ATCTTCGGCG GCTTCGCCCA CGCGGCTTTC ACCTCCATGA CGGGCATTGG CTTCGGGCTC
GTCCCGTGGG TGAGGAGCCC CCTGCTCAAG CCGGTTCCCC CGGTCCTGGG GCTGGGGACG
GCCGTCCTAC TGCACGCGGC GTTCAACCTG GCGGCCAGCC TCTTCGGGCC GCTGGCCTAC
GGGGTGCTGT TCCTGGTGCT CCTGCTCTAC GCGGCCATCA TCGTCGGGTG GCTCGCCTTC
GAGCGGCGGG CCATCCGCAG CGAGCTGCGG GAGGAGGTGG AGGCGGGCCT GGTGAGCCCC
GAGGACTACG CGGTCCTGCC GACCTACCTC CGGCGCACGG GCCGCTACCT GCGGCTGGCG
CTCACCGGCC GCTGGGGCGA GTGGTTCCGC GAGCGGCGGC TGCACGCCGC CGCGGTGGAC
CTCGCGCTGG CCAAGCGGGT CTCCCGCTCC GGGGCGCGGG CCGAGGACGA GCGGGTGGGC
CGCCTGCGGC ACAAGCTCCT GGAGCTGCGG GGGGCCGCCC CGGCGCCGGG GAGCGGAGGG
GCGCGGTGGA CGCCACCTGC GTGA
 
Protein sequence
MYTAPHAEGV CGQVSGALVG IGVLQSLVYL AFIRFVDLYE REPLRYVVPV FLWGFTVAVS 
VSLFFNTLFQ VAVSQISTMQ VAGFLTAVVA APVVEECSKG MALFLVFVVS YAASRRRGVV
EFSGVMDGIV YGSAVGFGFS LAEDLLYYAQ FGPETYAVRR IFGGFAHAAF TSMTGIGFGL
VPWVRSPLLK PVPPVLGLGT AVLLHAAFNL AASLFGPLAY GVLFLVLLLY AAIIVGWLAF
ERRAIRSELR EEVEAGLVSP EDYAVLPTYL RRTGRYLRLA LTGRWGEWFR ERRLHAAAVD
LALAKRVSRS GARAEDERVG RLRHKLLELR GAAPAPGSGG ARWTPPA