| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rxyl_1225 |
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| Symbol | |
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| ID | 4116286 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rubrobacter xylanophilus DSM 9941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008148 |
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| Strand | + |
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| Start bp | 1244007 |
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| End bp | 1245674 |
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| Gene Length | 1668 bp |
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| Protein Length | 555 aa |
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| Translation table | 11 |
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| GC content | 77% |
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| IMG OID | 638036014 |
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| Product | peptidase S49 |
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| Protein accession | YP_644002 |
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| Protein GI | 108804065 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0616] Periplasmic serine proteases (ClpP class) |
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| TIGRFAM ID | [TIGR00705] signal peptide peptidase SppA, 67K type
[TIGR00706] signal peptide peptidase SppA, 36K type |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0362989 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGTACCATT ACGGGGTGTC TGTTGCGACC GATTCCCTGA AGAGCGCGCG CCGGCTGCTC
GGAAACGCCC GGGCCCGCCT GCTGGGGCGC CCGCCGGACT ACCTGTGGCT GGAGGTCGCC
GGGGGCCTGC CGGAGTTCCC CCCGCGCCTC GGCCCGCTGC GCCGGCGCCT CTCGCCGCTC
TCCCCGGGGC CGAGCCTGGA GGAGCTGAGG GAGGCGCTCG ATGCCGTCCT CTACGACGGG
CGTCCCTCCG GGGTGGTGCT GAGGGTCCGC CGGCTGGACG CCGGCTGGGC GGCCCTGGAG
GAGCTGCGGG GCGAGCTCGC CCGGTTCCGG GAGGCGGGGG GGAGGGTCGT CTCCTACCTG
CGCGAGGACG CCGACAGCCG GGCCTACTAC CTGGCGTGCG CGGCCGACGA GGTCTTTGCC
GCCCCGCTGG CCGCGCTCGG GATCACGGGT CTCAGGACCC GGGTGGTCTT CGCGCGGGAG
GCCCTGGAGC GGGCCGGGCT GCGGGCCGAG GTGCTTGCGG TCTCGCCGTA CAAGTCCGCC
TACGACGCCC TCGCCCGCGC CGGCTTCTCC CGGGAGGCCC GCGAGCAGGC TCTTCGCCTG
CTCGACGGCC GGTTCTCGGA GCTGGTGGGG GCGGTCTCGC GGGCTCGGGG GATGCCGGAA
GAGGCCGTGC GCGGGCTCAT AGACCGGGCG CCGCTTGCGG CCCGGGAGGC GCTCGAGGCC
GGGCTGCTCG ACGGCGTGTG CTACGAGGAC GAGCTCCCGG GACGCCTCGG CGGGGCGAAG
GTGGCGGGGT GGCGGGAGGC CCGGCGGTCC CTCCGGGTTC CCCCCGGGAG GCCGCGGCGG
AGGAAGGTGG GGCTCGTGAG CGTCTCCGGC GTGATCGTGC GCGGCAGGAG CCGCTCGCTG
CCCGCCCCCA TCCCGTTCCT CGGGGGGGAG CAGGCGGGGG CCGAGTCGGT CGCGGCGGCG
CTGCGGGTGG CGGAGAGGGA CCGGCGCGTG GCGGCCGTGC TCCTGCACGT GGAGTCGCGC
GGCGGGGACG CGCTGGCCTC GGACCTGATC TGGAGGGAGG TCGCCCGCCT GCGCCGCAGC
AAGCCGGTGG TGGTCCTGAT GGGCAACTTC GCGGCCTCCG GGGGCTACTA CGTGGGCGTC
GCGGCGGACA GGATCGTGGC CCGCCGCAAC ACCCTGACCG GCTCCATCGG GGTGGTGCTG
GTGCGCCCGG TGGCCAAGGA GCTCTACGGG CGGCTCGGGC TGCGCCCCGA GGCGCTGCAG
CGGGGGAAGA ACGCCGCGAT TTTGGACCCC GCCACGGATC CGGGACCGGG GGAGCTGGAG
GCCCTCCGGC GCCAGATGGA GCACGCCTAC CGGGAGTTCC GGCAGCGGGT CGTGGAGGGG
CGCGGCATCC CCCAGGAGCG GCTGGAGGGG CTGGCCGGCG GGAGGGTCTG GACCGGCGAG
GAGGCCCGGA GGGAGGGGCT CGTGGACGCG ACCGGCGGGT TCCGGGAGGC CCTGAGGCTC
GCCGGGGAAC TCGGGGGGGT GGGGGTAGAC GGCCCGGGGG CGGTGCTCCC GATCTCGCCG
CGCAGGCAGG ATCTCCCGGC GCCGCCCGCG CCGGGCCGGG AGGGGGTGGC GCGCCCCTTG
GCCGGTCCGT GGGCGATCAT GCCCTACGAC GTCTGCGACA CCGGTTGA
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| Protein sequence | MYHYGVSVAT DSLKSARRLL GNARARLLGR PPDYLWLEVA GGLPEFPPRL GPLRRRLSPL
SPGPSLEELR EALDAVLYDG RPSGVVLRVR RLDAGWAALE ELRGELARFR EAGGRVVSYL
REDADSRAYY LACAADEVFA APLAALGITG LRTRVVFARE ALERAGLRAE VLAVSPYKSA
YDALARAGFS REAREQALRL LDGRFSELVG AVSRARGMPE EAVRGLIDRA PLAAREALEA
GLLDGVCYED ELPGRLGGAK VAGWREARRS LRVPPGRPRR RKVGLVSVSG VIVRGRSRSL
PAPIPFLGGE QAGAESVAAA LRVAERDRRV AAVLLHVESR GGDALASDLI WREVARLRRS
KPVVVLMGNF AASGGYYVGV AADRIVARRN TLTGSIGVVL VRPVAKELYG RLGLRPEALQ
RGKNAAILDP ATDPGPGELE ALRRQMEHAY REFRQRVVEG RGIPQERLEG LAGGRVWTGE
EARREGLVDA TGGFREALRL AGELGGVGVD GPGAVLPISP RRQDLPAPPA PGREGVARPL
AGPWAIMPYD VCDTG
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