Gene Rxyl_1216 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRxyl_1216 
Symbol 
ID4116278 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRubrobacter xylanophilus DSM 9941 
KingdomBacteria 
Replicon accessionNC_008148 
Strand
Start bp1236914 
End bp1237318 
Gene Length405 bp 
Protein Length134 aa 
Translation table11 
GC content71% 
IMG OID638036006 
Producthypothetical protein 
Protein accessionYP_643994 
Protein GI108804057 
COG category[S] Function unknown 
COG ID[COG0432] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00149] secondary thiamine-phosphate synthase enzyme 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.372222 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGCTCT CGGAGGTCAG CGTCAGGACC GGCCGGCGCT ACGAGTTCGT CAGCATAACC 
GAGGAGGTGC GCCGCGCGGT CGCGCGGTCG GGGGTGCGGG AGGGGGTGTG CGTCGTCTCC
TCCTCGCACA CCACCGCCGC GGTCACCGTC AACGAGGACT ACGACCCCGA CGTCGCCCGC
GACCTCACCG CCGCCAGCGA GGCCCTCATA AACGCCCTCG ACGTGAGCTT CGAGCACGCC
GAGGGCAACA GCGACTCGCA CCTGCTCGCC AGCCTCTTCG GGCAGTCCGA GACCCTTCTG
GTGCGGGACG GGGAGCTGCA GCTCGGGCGC TGGCAGGGGG TGTTCCTGGC GGAGTTCGAC
GGCCCCAGAG ACCGGACCGT CCGGGTGGCG GTCTTGGCGG GATAG
 
Protein sequence
MKLSEVSVRT GRRYEFVSIT EEVRRAVARS GVREGVCVVS SSHTTAAVTV NEDYDPDVAR 
DLTAASEALI NALDVSFEHA EGNSDSHLLA SLFGQSETLL VRDGELQLGR WQGVFLAEFD
GPRDRTVRVA VLAG